RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 KDRP35968 1356 aa11.74□□□□□ -0.53
GTF2I-219ENST00000621040 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
GTF2I-219ENST00000621040 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
GTF2I-219ENST00000621040 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
GTF2I-219ENST00000621040 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
GTF2I-219ENST00000621040 MRC1P22897 1456 aa11.72□□□□□ -0.53
GTF2I-219ENST00000621040 PARD3Q8TEW0 1356 aa11.72□□□□□ -0.53
GTF2I-219ENST00000621040 ANKRD24Q8TF21 1146 aa11.72□□□□□ -0.53
GTF2I-219ENST00000621040 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
GTF2I-219ENST00000621040 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
GTF2I-219ENST00000621040 C5P01031 1676 aa11.71□□□□□ -0.54
GTF2I-219ENST00000621040 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.54
GTF2I-219ENST00000621040 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.54
GTF2I-219ENST00000621040 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
GTF2I-219ENST00000621040 DLG5Q8TDM6 1919 aa11.69□□□□□ -0.54
GTF2I-219ENST00000621040 FBLN1P23142 703 aa11.69□□□□□ -0.54
GTF2I-219ENST00000621040 CCDC136Q96JN2 1154 aa11.69□□□□□ -0.54
GTF2I-219ENST00000621040 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
GTF2I-219ENST00000621040 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
GTF2I-219ENST00000621040 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
GTF2I-219ENST00000621040 TJP1Q07157 1748 aa11.67□□□□□ -0.54
GTF2I-219ENST00000621040 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
GTF2I-219ENST00000621040 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
GTF2I-219ENST00000621040 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
GTF2I-219ENST00000621040 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
GTF2I-219ENST00000621040 EVA1CP58658 441 aa11.66□□□□□ -0.54
GTF2I-219ENST00000621040 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
GTF2I-219ENST00000621040 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
GTF2I-219ENST00000621040 IL2RBP14784 551 aa11.64□□□□□ -0.55
GTF2I-219ENST00000621040 IL13P35225 146 aa11.64□□□□□ -0.55
GTF2I-219ENST00000621040 EIF4A2Q14240 407 aaKnown RBP11.64□□□□□ -0.55
GTF2I-219ENST00000621040 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
GTF2I-219ENST00000621040 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
GTF2I-219ENST00000621040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
GTF2I-219ENST00000621040 KNSTRNQ9Y448 316 aa11.63□□□□□ -0.55
GTF2I-219ENST00000621040 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
GTF2I-219ENST00000621040 CAMKK2Q96RR4 588 aa11.62□□□□□ -0.55
GTF2I-219ENST00000621040 AMPHP49418 695 aa11.62□□□□□ -0.55
GTF2I-219ENST00000621040 EYA1Q99502 592 aa11.62□□□□□ -0.55
GTF2I-219ENST00000621040 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
GTF2I-219ENST00000621040 DDB1Q16531 1140 aa11.61□□□□□ -0.55
GTF2I-219ENST00000621040 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
GTF2I-219ENST00000621040 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
GTF2I-219ENST00000621040 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
GTF2I-219ENST00000621040 PLSCR1O15162 318 aa11.6□□□□□ -0.55
GTF2I-219ENST00000621040 SOX12O15370 315 aa11.6□□□□□ -0.55
GTF2I-219ENST00000621040 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
GTF2I-219ENST00000621040 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
GTF2I-219ENST00000621040 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
GTF2I-219ENST00000621040 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
GTF2I-219ENST00000621040 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
GTF2I-219ENST00000621040 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
GTF2I-219ENST00000621040 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
GTF2I-219ENST00000621040 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
GTF2I-219ENST00000621040 EXOC5O00471 708 aa11.57□□□□□ -0.56
GTF2I-219ENST00000621040 CYP27B1O15528 508 aa11.57□□□□□ -0.56
GTF2I-219ENST00000621040 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
GTF2I-219ENST00000621040 PPP2R1AP30153 589 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 FKBP8Q14318 412 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 CCER2I3L3R5 266 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
GTF2I-219ENST00000621040 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
GTF2I-219ENST00000621040 MTHFSP49914 203 aa11.55□□□□□ -0.56
GTF2I-219ENST00000621040 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
GTF2I-219ENST00000621040 PROM2Q8N271 834 aa11.55□□□□□ -0.56
GTF2I-219ENST00000621040 FAM182BQ5T319 152 aa11.54□□□□□ -0.56
GTF2I-219ENST00000621040 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
GTF2I-219ENST00000621040 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
GTF2I-219ENST00000621040 KIAA1551Q9HCM1 1747 aa11.54□□□□□ -0.56
GTF2I-219ENST00000621040 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
GTF2I-219ENST00000621040 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
GTF2I-219ENST00000621040 PHKG2P15735 406 aa11.53□□□□□ -0.56
GTF2I-219ENST00000621040 CCDC184Q52MB2 194 aa11.53□□□□□ -0.56
GTF2I-219ENST00000621040 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
GTF2I-219ENST00000621040 TRIM37O94972 964 aa11.53□□□□□ -0.56
GTF2I-219ENST00000621040 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
GTF2I-219ENST00000621040 CEMIPQ8WUJ3 1361 aa11.52□□□□□ -0.56
GTF2I-219ENST00000621040 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
GTF2I-219ENST00000621040 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
GTF2I-219ENST00000621040 RALBP1Q15311 655 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
GTF2I-219ENST00000621040 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 NRXN2Q9P2S2 1712 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 BAG6P46379 1132 aa11.51□□□□□ -0.57
GTF2I-219ENST00000621040 KCNQ2O43526 872 aa11.5□□□□□ -0.57
GTF2I-219ENST00000621040 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
GTF2I-219ENST00000621040 EZH2Q15910 746 aaKnown RBP11.5□□□□□ -0.57
GTF2I-219ENST00000621040 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
GTF2I-219ENST00000621040 RAPGEF4Q8WZA2 1011 aa11.5□□□□□ -0.57
GTF2I-219ENST00000621040 DIAPH1O60610 1272 aaKnown RBP11.49□□□□□ -0.57
GTF2I-219ENST00000621040 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
GTF2I-219ENST00000621040 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
GTF2I-219ENST00000621040 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
GTF2I-219ENST00000621040 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms