RNA–Protein interactions for RNA: ENST00000620788.1

PHLDB1-227, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 5,898 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-227ENST00000620788 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 SH2D4BQ5SQS7 431 aa12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 WHAMMQ8TF30 809 aa12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 KIF4BQ2VIQ3 1234 aa12.47□□□□□ -0.41
PHLDB1-227ENST00000620788 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 BUB1BO60566 1050 aaPredicted RBP12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 ZKSCAN1P17029 563 aaPredicted RBP12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
PHLDB1-227ENST00000620788 SKAP1Q86WV1 359 aa12.46□□□□□ -0.42
PHLDB1-227ENST00000620788 SH3GL3Q99963 347 aa12.46□□□□□ -0.42
PHLDB1-227ENST00000620788 CEP128Q6ZU80 1094 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 KIF5CO60282 957 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 SSBP05455 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 IRX1P78414 480 aaPredicted RBP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 FILIP1LQ4L180 1135 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 PDCP20941 246 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 HNRNPH2P55795 449 aaKnown RBP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 KRT85P78386 507 aa12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
PHLDB1-227ENST00000620788 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 ATRIPQ8WXE1 791 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 PPP1R9BQ96SB3 815 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 ARHGAP25P42331 645 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 MYO1CO00159 1063 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 VPS8Q8N3P4 1428 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 SEPT7Q16181 437 aaKnown RBP12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 CCDC186Q7Z3E2 898 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 MORC1Q86VD1 984 aa12.44□□□□□ -0.42
PHLDB1-227ENST00000620788 PFDN1O60925 122 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 CEP85LQ5SZL2 805 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 PHACTR2O75167 634 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 RIPK4P57078 832 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 CCDC6Q16204 474 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 TERF2Q15554 542 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 EFCAB13Q8IY85 973 aa12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 N4BP2L2Q92802 583 aaPredicted RBP12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 LUC7L2Q9Y383 392 aaKnown RBP12.43□□□□□ -0.42
PHLDB1-227ENST00000620788 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 CCDC160A6NGH7 325 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 PANK3Q9H999 370 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 ZBTB17Q13105 803 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 SMC1AQ14683 1233 aaKnown RBP12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 SH3BGRP55822 239 aaPredicted RBP12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 CEP104O60308 925 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 HDXQ7Z353 690 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 TRIM4Q9C037 500 aa12.42□□□□□ -0.42
PHLDB1-227ENST00000620788 ELF2Q15723 593 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 SKILP12757 684 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 PCK1P35558 622 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 TXLNAP40222 546 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 CCDC92Q53HC0 331 aaPredicted RBP12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 SYT10Q6XYQ8 523 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 VCXQ9H320 206 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 FRMD3A2A2Y4 597 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 TTC36A6NLP5 189 aa12.41□□□□□ -0.42
PHLDB1-227ENST00000620788 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 RAD51AP2Q09MP3 1159 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 AFAP1L1Q8TED9 768 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 GOLGA1Q92805 767 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 DNAI1Q9UI46 699 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 PSMD2Q13200 908 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 FAM76AQ8TAV0 307 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 OPA1O60313 960 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 MAGEA9P43362 315 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 ZSWIM4Q9H7M6 989 aa12.4□□□□□ -0.42
PHLDB1-227ENST00000620788 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms