RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
MUC1-229ENST00000620770 TRIM37O94972 964 aa18.11■□□□□ 0.49
MUC1-229ENST00000620770 OVOS2A0A0G2JMS6 1433 aa18.1■□□□□ 0.49
MUC1-229ENST00000620770 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
MUC1-229ENST00000620770 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
MUC1-229ENST00000620770 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
MUC1-229ENST00000620770 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.49
MUC1-229ENST00000620770 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
MUC1-229ENST00000620770 NUDCQ9Y266 331 aa18.08■□□□□ 0.48
MUC1-229ENST00000620770 HMOX1P09601 288 aa18.07■□□□□ 0.48
MUC1-229ENST00000620770 APBA3O96018 575 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 IL2RBP14784 551 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 DDB1Q16531 1140 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 RAPGEF4Q8WZA2 1011 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 CDCA7Q9BWT1 371 aaPredicted RBP18.06■□□□□ 0.48
MUC1-229ENST00000620770 MEGF6O75095 1541 aa18.06■□□□□ 0.48
MUC1-229ENST00000620770 PSDA5PKW4 1024 aaPredicted RBP18.05■□□□□ 0.48
MUC1-229ENST00000620770 U2AF1L5P0DN76 240 aaPredicted RBP18.05■□□□□ 0.48
MUC1-229ENST00000620770 U2AF1Q01081 240 aaKnown RBP eCLIP18.05■□□□□ 0.48
MUC1-229ENST00000620770 EZH2Q15910 746 aaKnown RBP18.05■□□□□ 0.48
MUC1-229ENST00000620770 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
MUC1-229ENST00000620770 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
MUC1-229ENST00000620770 TATP17735 454 aaPredicted RBP18.03■□□□□ 0.48
MUC1-229ENST00000620770 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
MUC1-229ENST00000620770 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.48
MUC1-229ENST00000620770 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
MUC1-229ENST00000620770 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
MUC1-229ENST00000620770 MIER1Q8N108 512 aa18■□□□□ 0.47
MUC1-229ENST00000620770 KDRP35968 1356 aa18■□□□□ 0.47
MUC1-229ENST00000620770 BCL9O00512 1426 aa17.99■□□□□ 0.47
MUC1-229ENST00000620770 EXOC5O00471 708 aa17.98■□□□□ 0.47
MUC1-229ENST00000620770 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
MUC1-229ENST00000620770 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
MUC1-229ENST00000620770 NHSQ6T4R5 1651 aa17.98■□□□□ 0.47
MUC1-229ENST00000620770 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
MUC1-229ENST00000620770 DDX54Q8TDD1 881 aaKnown RBP17.97■□□□□ 0.47
MUC1-229ENST00000620770 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
MUC1-229ENST00000620770 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
MUC1-229ENST00000620770 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
MUC1-229ENST00000620770 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
MUC1-229ENST00000620770 FCHSD2O94868 740 aa17.94■□□□□ 0.46
MUC1-229ENST00000620770 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
MUC1-229ENST00000620770 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
MUC1-229ENST00000620770 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
MUC1-229ENST00000620770 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
MUC1-229ENST00000620770 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
MUC1-229ENST00000620770 PCDH11XQ9BZA7 1347 aa17.94■□□□□ 0.46
MUC1-229ENST00000620770 PCDH11YQ9BZA8 1340 aa17.94■□□□□ 0.46
MUC1-229ENST00000620770 SHANK3Q9BYB0 1731 aa17.93■□□□□ 0.46
MUC1-229ENST00000620770 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 PLSCR1O15162 318 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 NEFMP07197 916 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
MUC1-229ENST00000620770 AMOTQ4VCS5 1084 aa17.91■□□□□ 0.46
MUC1-229ENST00000620770 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
MUC1-229ENST00000620770 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
MUC1-229ENST00000620770 BTAF1O14981 1849 aa17.91■□□□□ 0.46
MUC1-229ENST00000620770 CYP27B1O15528 508 aa17.9■□□□□ 0.46
MUC1-229ENST00000620770 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
MUC1-229ENST00000620770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.9■□□□□ 0.46
MUC1-229ENST00000620770 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
MUC1-229ENST00000620770 PNNQ9H307 717 aaKnown RBP17.89■□□□□ 0.45
MUC1-229ENST00000620770 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
MUC1-229ENST00000620770 PHKG2P15735 406 aa17.88■□□□□ 0.45
MUC1-229ENST00000620770 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
MUC1-229ENST00000620770 CASZ1Q86V15 1759 aa17.88■□□□□ 0.45
MUC1-229ENST00000620770 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
MUC1-229ENST00000620770 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
MUC1-229ENST00000620770 ACSBG1Q96GR2 724 aa17.87■□□□□ 0.45
MUC1-229ENST00000620770 PLEKHF1Q96S99 279 aa17.87■□□□□ 0.45
MUC1-229ENST00000620770 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
MUC1-229ENST00000620770 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
MUC1-229ENST00000620770 RUNDC1Q96C34 613 aa17.86■□□□□ 0.45
MUC1-229ENST00000620770 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
MUC1-229ENST00000620770 MAP3K5Q99683 1374 aa17.84■□□□□ 0.45
MUC1-229ENST00000620770 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
MUC1-229ENST00000620770 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
MUC1-229ENST00000620770 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
MUC1-229ENST00000620770 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
MUC1-229ENST00000620770 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
MUC1-229ENST00000620770 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
MUC1-229ENST00000620770 ANO8Q9HCE9 1232 aaPredicted RBP17.83■□□□□ 0.44
MUC1-229ENST00000620770 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
MUC1-229ENST00000620770 GNAT3A8MTJ3 354 aa17.82■□□□□ 0.44
MUC1-229ENST00000620770 KCNQ2O43526 872 aa17.82■□□□□ 0.44
MUC1-229ENST00000620770 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
MUC1-229ENST00000620770 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
MUC1-229ENST00000620770 PAPPAQ13219 1627 aa17.81■□□□□ 0.44
MUC1-229ENST00000620770 SPON1Q9HCB6 807 aa17.81■□□□□ 0.44
MUC1-229ENST00000620770 APAF1O14727 1248 aa17.8■□□□□ 0.44
MUC1-229ENST00000620770 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
MUC1-229ENST00000620770 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
MUC1-229ENST00000620770 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
MUC1-229ENST00000620770 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
MUC1-229ENST00000620770 RIPK4P57078 832 aa17.79■□□□□ 0.44
MUC1-229ENST00000620770 PROM2Q8N271 834 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms