RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 IGF1RP08069 1367 aa7.85□□□□□ -1.15
TARDBP-220ENST00000618606 BCRP11274 1271 aa7.85□□□□□ -1.15
TARDBP-220ENST00000618606 FOXR1Q6PIV2 292 aa7.85□□□□□ -1.15
TARDBP-220ENST00000618606 PODNQ7Z5L7 613 aa7.85□□□□□ -1.15
TARDBP-220ENST00000618606 ESPNB1AK53 854 aa7.84□□□□□ -1.15
TARDBP-220ENST00000618606 PROCP04070 461 aa7.84□□□□□ -1.15
TARDBP-220ENST00000618606 PPP2R2DQ66LE6 453 aa7.84□□□□□ -1.15
TARDBP-220ENST00000618606 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
TARDBP-220ENST00000618606 LRRC4BQ9NT99 713 aa7.84□□□□□ -1.15
TARDBP-220ENST00000618606 NEDD1Q8NHV4 660 aa7.83□□□□□ -1.16
TARDBP-220ENST00000618606 RHOQP17081 205 aa7.82□□□□□ -1.16
TARDBP-220ENST00000618606 RAB15P59190 212 aa7.82□□□□□ -1.16
TARDBP-220ENST00000618606 DBN1Q16643 649 aa7.82□□□□□ -1.16
TARDBP-220ENST00000618606 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
TARDBP-220ENST00000618606 ACDQ96AP0 544 aa7.82□□□□□ -1.16
TARDBP-220ENST00000618606 GPR25O00155 361 aa7.81□□□□□ -1.16
TARDBP-220ENST00000618606 GPC1P35052 558 aa7.81□□□□□ -1.16
TARDBP-220ENST00000618606 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
TARDBP-220ENST00000618606 SEPT12Q8IYM1 358 aa7.81□□□□□ -1.16
TARDBP-220ENST00000618606 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
TARDBP-220ENST00000618606 H7C1W4 665 aa7.8□□□□□ -1.16
TARDBP-220ENST00000618606 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-220ENST00000618606 GALNT6Q8NCL4 622 aa7.8□□□□□ -1.16
TARDBP-220ENST00000618606 DYRK1BQ9Y463 629 aa7.8□□□□□ -1.16
TARDBP-220ENST00000618606 SKIV2LQ15477 1246 aaKnown RBP7.79□□□□□ -1.16
TARDBP-220ENST00000618606 RIPOR1Q6ZS17 1223 aa7.79□□□□□ -1.16
TARDBP-220ENST00000618606 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.79□□□□□ -1.16
TARDBP-220ENST00000618606 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
TARDBP-220ENST00000618606 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
TARDBP-220ENST00000618606 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
TARDBP-220ENST00000618606 TRERF1Q96PN7 1200 aa7.78□□□□□ -1.16
TARDBP-220ENST00000618606 ATP5J2-PTCD1G3V325 749 aa7.77□□□□□ -1.17
TARDBP-220ENST00000618606 K7ELQ4 463 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-220ENST00000618606 OIP5O43482 229 aa7.77□□□□□ -1.17
TARDBP-220ENST00000618606 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
TARDBP-220ENST00000618606 MX2P20592 715 aa7.76□□□□□ -1.17
TARDBP-220ENST00000618606 AP1G2O75843 785 aa7.75□□□□□ -1.17
TARDBP-220ENST00000618606 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
TARDBP-220ENST00000618606 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
TARDBP-220ENST00000618606 GAS2L1Q99501 681 aaPredicted RBP7.75□□□□□ -1.17
TARDBP-220ENST00000618606 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
TARDBP-220ENST00000618606 MEN1O00255 615 aa7.74□□□□□ -1.17
TARDBP-220ENST00000618606 POU4F2Q12837 409 aa7.74□□□□□ -1.17
TARDBP-220ENST00000618606 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
TARDBP-220ENST00000618606 PROCA1Q8NCQ7 364 aaPredicted RBP7.74□□□□□ -1.17
TARDBP-220ENST00000618606 HMX1Q9NP08 348 aaPredicted RBP7.74□□□□□ -1.17
TARDBP-220ENST00000618606 KRBA1A5PL33 1030 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 BAG6P46379 1132 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 MAP2K3P46734 347 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 CCDC125Q86Z20 511 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
TARDBP-220ENST00000618606 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
TARDBP-220ENST00000618606 SNRPNP63162 240 aaKnown RBP7.72□□□□□ -1.17
TARDBP-220ENST00000618606 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
TARDBP-220ENST00000618606 NBPF10Q6P3W6 841 aaKnown RBP7.72□□□□□ -1.17
TARDBP-220ENST00000618606 NBPF15Q8N660 670 aa7.72□□□□□ -1.17
TARDBP-220ENST00000618606 OXCT2Q9BYC2 517 aaPredicted RBP7.72□□□□□ -1.17
TARDBP-220ENST00000618606 KDM4CQ9H3R0 1056 aa7.72□□□□□ -1.17
TARDBP-220ENST00000618606 USP17L8P0C7I0 530 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 FAM117AQ9C073 453 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
TARDBP-220ENST00000618606 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
TARDBP-220ENST00000618606 MKL2Q9ULH7 1088 aa7.71□□□□□ -1.18
TARDBP-220ENST00000618606 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
TARDBP-220ENST00000618606 F11P03951 625 aa7.7□□□□□ -1.18
TARDBP-220ENST00000618606 CLN3Q13286 438 aa7.7□□□□□ -1.18
TARDBP-220ENST00000618606 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
TARDBP-220ENST00000618606 Q8N3U1 123 aa7.7□□□□□ -1.18
TARDBP-220ENST00000618606 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
TARDBP-220ENST00000618606 SHISA8B8ZZ34 492 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 COL8A1P27658 744 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 CYP2U1Q7Z449 544 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 BCANQ96GW7 911 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
TARDBP-220ENST00000618606 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
TARDBP-220ENST00000618606 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
TARDBP-220ENST00000618606 GDF2Q9UK05 429 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-220ENST00000618606 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 WASLO00401 505 aaPredicted RBP7.66□□□□□ -1.18
TARDBP-220ENST00000618606 THBS1P07996 1170 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 FURINP09958 794 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 RNF20Q5VTR2 975 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 C1orf229Q6ZS94 237 aaPredicted RBP7.66□□□□□ -1.18
TARDBP-220ENST00000618606 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
TARDBP-220ENST00000618606 EDARADDQ8WWZ3 215 aa7.65□□□□□ -1.18
TARDBP-220ENST00000618606 PCDHB9Q9Y5E1 797 aa7.65□□□□□ -1.18
TARDBP-220ENST00000618606 TRAK2O60296 914 aa7.64□□□□□ -1.19
TARDBP-220ENST00000618606 GOLGA6L1Q8N7Z2 621 aa7.64□□□□□ -1.19
TARDBP-220ENST00000618606 RRAGCQ9HB90 399 aa7.64□□□□□ -1.19
TARDBP-220ENST00000618606 FBXO45P0C2W1 286 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 HOXB4P17483 251 aaPredicted RBP7.63□□□□□ -1.19
TARDBP-220ENST00000618606 RFC5P40937 340 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 SCTRP47872 440 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 LBRQ14739 615 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms