RNA–Protein interactions for RNA: ENST00000616596.4

RDM1-220, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 1,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-220ENST00000616596 DDB1Q16531 1140 aa20.91■□□□□ 0.94
RDM1-220ENST00000616596 SBF2Q86WG5 1849 aa20.91■□□□□ 0.94
RDM1-220ENST00000616596 NUDCQ9Y266 331 aa20.9■□□□□ 0.94
RDM1-220ENST00000616596 VIRMAQ69YN4 1812 aaKnown RBP20.9■□□□□ 0.94
RDM1-220ENST00000616596 KRT27Q7Z3Y8 459 aa20.89■□□□□ 0.93
RDM1-220ENST00000616596 EXOC5O00471 708 aa20.88■□□□□ 0.93
RDM1-220ENST00000616596 EP400Q96L91 3159 aa20.88■□□□□ 0.93
RDM1-220ENST00000616596 U2AF1L5P0DN76 240 aaPredicted RBP20.87■□□□□ 0.93
RDM1-220ENST00000616596 U2AF1Q01081 240 aaKnown RBP eCLIP20.87■□□□□ 0.93
RDM1-220ENST00000616596 FAM182BQ5T319 152 aa20.87■□□□□ 0.93
RDM1-220ENST00000616596 ZCRB1Q8TBF4 217 aaKnown RBP20.87■□□□□ 0.93
RDM1-220ENST00000616596 PLEKHG2Q9H7P9 1386 aa20.86■□□□□ 0.93
RDM1-220ENST00000616596 PDE3BQ13370 1112 aa20.86■□□□□ 0.93
RDM1-220ENST00000616596 MARCH10Q8NA82 808 aaPredicted RBP20.86■□□□□ 0.93
RDM1-220ENST00000616596 RSPH6AQ9H0K4 717 aa20.86■□□□□ 0.93
RDM1-220ENST00000616596 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
RDM1-220ENST00000616596 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
RDM1-220ENST00000616596 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
RDM1-220ENST00000616596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
RDM1-220ENST00000616596 FCHSD2O94868 740 aa20.82■□□□□ 0.92
RDM1-220ENST00000616596 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
RDM1-220ENST00000616596 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
RDM1-220ENST00000616596 SPG7Q9UQ90 795 aa20.82■□□□□ 0.92
RDM1-220ENST00000616596 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
RDM1-220ENST00000616596 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
RDM1-220ENST00000616596 ITGB4P16144 1822 aa20.81■□□□□ 0.92
RDM1-220ENST00000616596 CYP27B1O15528 508 aa20.81■□□□□ 0.92
RDM1-220ENST00000616596 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
RDM1-220ENST00000616596 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
RDM1-220ENST00000616596 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
RDM1-220ENST00000616596 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
RDM1-220ENST00000616596 PLEKHO1Q53GL0 409 aaPredicted RBP20.8■□□□□ 0.92
RDM1-220ENST00000616596 MIER1Q8N108 512 aa20.8■□□□□ 0.92
RDM1-220ENST00000616596 KAT6BQ8WYB5 2073 aa20.8■□□□□ 0.92
RDM1-220ENST00000616596 BCL9O00512 1426 aa20.79■□□□□ 0.92
RDM1-220ENST00000616596 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
RDM1-220ENST00000616596 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
RDM1-220ENST00000616596 PHACTR3Q96KR7 559 aa20.79■□□□□ 0.92
RDM1-220ENST00000616596 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
RDM1-220ENST00000616596 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
RDM1-220ENST00000616596 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
RDM1-220ENST00000616596 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
RDM1-220ENST00000616596 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
RDM1-220ENST00000616596 PHKG2P15735 406 aa20.77■□□□□ 0.92
RDM1-220ENST00000616596 ZNF530Q6P9A1 599 aaPredicted RBP20.77■□□□□ 0.92
RDM1-220ENST00000616596 FAM196AQ6ZSG2 479 aa20.76■□□□□ 0.91
RDM1-220ENST00000616596 IFNL2Q8IZJ0 200 aa20.76■□□□□ 0.91
RDM1-220ENST00000616596 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
RDM1-220ENST00000616596 BTAF1O14981 1849 aa20.75■□□□□ 0.91
RDM1-220ENST00000616596 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
RDM1-220ENST00000616596 KDM6AO15550 1401 aaPredicted RBP20.73■□□□□ 0.91
RDM1-220ENST00000616596 CCDC146Q8IYE0 955 aa20.73■□□□□ 0.91
RDM1-220ENST00000616596 AKAP4Q5JQC9 854 aa20.72■□□□□ 0.91
RDM1-220ENST00000616596 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
RDM1-220ENST00000616596 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
RDM1-220ENST00000616596 GAS2L2Q8NHY3 880 aa20.71■□□□□ 0.91
RDM1-220ENST00000616596 ACSBG1Q96GR2 724 aa20.71■□□□□ 0.91
RDM1-220ENST00000616596 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
RDM1-220ENST00000616596 PTF1AQ7RTS3 328 aa20.7■□□□□ 0.9
RDM1-220ENST00000616596 MAP3K5Q99683 1374 aa20.7■□□□□ 0.9
RDM1-220ENST00000616596 KCNQ2O43526 872 aa20.69■□□□□ 0.9
RDM1-220ENST00000616596 TRIM37O94972 964 aa20.69■□□□□ 0.9
RDM1-220ENST00000616596 UPF1Q92900 1129 aaKnown RBP eCLIP20.69■□□□□ 0.9
RDM1-220ENST00000616596 RUNDC1Q96C34 613 aa20.69■□□□□ 0.9
RDM1-220ENST00000616596 MAPK8IP3Q9UPT6 1336 aa20.69■□□□□ 0.9
RDM1-220ENST00000616596 MPRIPQ6WCQ1 1025 aa20.68■□□□□ 0.9
RDM1-220ENST00000616596 NEFMP07197 916 aa20.67■□□□□ 0.9
RDM1-220ENST00000616596 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
RDM1-220ENST00000616596 NFE2L2Q16236 605 aa20.67■□□□□ 0.9
RDM1-220ENST00000616596 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
RDM1-220ENST00000616596 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
RDM1-220ENST00000616596 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
RDM1-220ENST00000616596 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
RDM1-220ENST00000616596 MRC1P22897 1456 aa20.66■□□□□ 0.9
RDM1-220ENST00000616596 RGPD3A6NKT7 1758 aaPredicted RBP20.66■□□□□ 0.9
RDM1-220ENST00000616596 RGPD4Q7Z3J3 1758 aa20.66■□□□□ 0.9
RDM1-220ENST00000616596 GNAT3A8MTJ3 354 aa20.65■□□□□ 0.9
RDM1-220ENST00000616596 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
RDM1-220ENST00000616596 LY75O60449 1722 aa20.64■□□□□ 0.9
RDM1-220ENST00000616596 RNMTO43148 476 aaKnown RBP20.64■□□□□ 0.89
RDM1-220ENST00000616596 TMPOP42166 694 aaKnown RBP20.64■□□□□ 0.89
RDM1-220ENST00000616596 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
RDM1-220ENST00000616596 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
RDM1-220ENST00000616596 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
RDM1-220ENST00000616596 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
RDM1-220ENST00000616596 APAF1O14727 1248 aa20.62■□□□□ 0.89
RDM1-220ENST00000616596 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
RDM1-220ENST00000616596 RRP7AQ9Y3A4 280 aaKnown RBP20.62■□□□□ 0.89
RDM1-220ENST00000616596 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
RDM1-220ENST00000616596 RREB1Q92766 1687 aa20.61■□□□□ 0.89
RDM1-220ENST00000616596 SOCS7O14512 581 aa20.6■□□□□ 0.89
RDM1-220ENST00000616596 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
RDM1-220ENST00000616596 RIPK4P57078 832 aa20.6■□□□□ 0.89
RDM1-220ENST00000616596 DCTN1Q14203 1278 aa20.6■□□□□ 0.89
RDM1-220ENST00000616596 MCM10Q7L590 875 aa20.6■□□□□ 0.89
RDM1-220ENST00000616596 PIGBQ92521 554 aa20.6■□□□□ 0.89
RDM1-220ENST00000616596 APBA3O96018 575 aa20.59■□□□□ 0.89
RDM1-220ENST00000616596 NEUROD2Q15784 382 aa20.59■□□□□ 0.89
RDM1-220ENST00000616596 UBR2Q8IWV8 1755 aa20.59■□□□□ 0.89
RDM1-220ENST00000616596 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms