RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-238ENST00000616352 MAPK8IP3Q9UPT6 1336 aa30.46■■■□□ 2.47
ACACA-238ENST00000616352 BARGINQ6ZT62 677 aa30.46■■■□□ 2.47
ACACA-238ENST00000616352 THSD7AQ9UPZ6 1657 aa30.45■■■□□ 2.47
ACACA-238ENST00000616352 TATP17735 454 aaPredicted RBP30.45■■■□□ 2.47
ACACA-238ENST00000616352 GJD4Q96KN9 370 aaPredicted RBP30.45■■■□□ 2.47
ACACA-238ENST00000616352 LRRC37A3O60309 1634 aa30.45■■■□□ 2.46
ACACA-238ENST00000616352 QTRT2Q9H974 415 aaKnown RBP30.44■■■□□ 2.46
ACACA-238ENST00000616352 NEFMP07197 916 aa30.44■■■□□ 2.46
ACACA-238ENST00000616352 APAF1O14727 1248 aa30.43■■■□□ 2.46
ACACA-238ENST00000616352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.42■■■□□ 2.463e-9■■■■□ 26.7
ACACA-238ENST00000616352 RGS17Q9UGC6 210 aaPredicted RBP30.42■■■□□ 2.46
ACACA-238ENST00000616352 MTHFSDQ2M296 383 aaKnown RBP30.4■■■□□ 2.46
ACACA-238ENST00000616352 CDCA7Q9BWT1 371 aaPredicted RBP30.4■■■□□ 2.46
ACACA-238ENST00000616352 AMOTQ4VCS5 1084 aa30.4■■■□□ 2.46
ACACA-238ENST00000616352 TMPOP42166 694 aaKnown RBP30.39■■■□□ 2.46
ACACA-238ENST00000616352 NFE2L2Q16236 605 aa30.39■■■□□ 2.46
ACACA-238ENST00000616352 PLEKHO1Q53GL0 409 aaPredicted RBP30.39■■■□□ 2.46
ACACA-238ENST00000616352 FAM98CQ17RN3 349 aaKnown RBP30.38■■■□□ 2.45
ACACA-238ENST00000616352 GAS2L2Q8NHY3 880 aa30.37■■■□□ 2.45
ACACA-238ENST00000616352 TNS2Q63HR2 1409 aa30.36■■■□□ 2.45
ACACA-238ENST00000616352 SENP3-EIF4A1A0A087X0R7 540 aa30.36■■■□□ 2.45
ACACA-238ENST00000616352 SPG7Q9UQ90 795 aa30.36■■■□□ 2.45
ACACA-238ENST00000616352 RRP7AQ9Y3A4 280 aaKnown RBP30.36■■■□□ 2.45
ACACA-238ENST00000616352 ONECUT3O60422 494 aaPredicted RBP30.35■■■□□ 2.45
ACACA-238ENST00000616352 HNRNPUQ00839 825 aaKnown RBP eCLIP30.34■■■□□ 2.45
ACACA-238ENST00000616352 NCBP3Q53F19 620 aaKnown RBP30.34■■■□□ 2.45
ACACA-238ENST00000616352 ZCRB1Q8TBF4 217 aaKnown RBP30.34■■■□□ 2.45
ACACA-238ENST00000616352 ADAMTS7Q9UKP4 1686 aa30.34■■■□□ 2.45
ACACA-238ENST00000616352 SCN11AQ9UI33 1791 aa30.34■■■□□ 2.45
ACACA-238ENST00000616352 BRWD3Q6RI45 1802 aa30.34■■■□□ 2.45
ACACA-238ENST00000616352 PHF23Q9BUL5 403 aaPredicted RBP30.33■■■□□ 2.45
ACACA-238ENST00000616352 ZNF530Q6P9A1 599 aaPredicted RBP30.33■■■□□ 2.45
ACACA-238ENST00000616352 RBM6P78332 1123 aaKnown RBP30.32■■■□□ 2.44
ACACA-238ENST00000616352 RIPK4P57078 832 aa30.31■■■□□ 2.44
ACACA-238ENST00000616352 NEUROD2Q15784 382 aa30.31■■■□□ 2.44
ACACA-238ENST00000616352 NGEFQ8N5V2 710 aa30.31■■■□□ 2.44
ACACA-238ENST00000616352 PCDH11XQ9BZA7 1347 aa30.31■■■□□ 2.44
ACACA-238ENST00000616352 PCDH11YQ9BZA8 1340 aa30.31■■■□□ 2.44
ACACA-238ENST00000616352 CYP27B1O15528 508 aa30.3■■■□□ 2.44
ACACA-238ENST00000616352 MAP3K5Q99683 1374 aa30.3■■■□□ 2.44
ACACA-238ENST00000616352 EXOC5O00471 708 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 DDB1Q16531 1140 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 CCDC27Q2M243 656 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 AKAP4Q5JQC9 854 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 POTEAQ6S8J7 498 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 TRIM35Q9UPQ4 493 aa30.29■■■□□ 2.44
ACACA-238ENST00000616352 PHKG2P15735 406 aa30.27■■■□□ 2.44
ACACA-238ENST00000616352 YTHDC1Q96MU7 727 aaKnown RBP30.27■■■□□ 2.44
ACACA-238ENST00000616352 GNAT3A8MTJ3 354 aa30.26■■■□□ 2.44
ACACA-238ENST00000616352 IFNL2Q8IZJ0 200 aa30.26■■■□□ 2.44
ACACA-238ENST00000616352 SALL2Q9Y467 1007 aaPredicted RBP30.26■■■□□ 2.44
ACACA-238ENST00000616352 C1orf141Q5JVX7 400 aa30.25■■■□□ 2.43
ACACA-238ENST00000616352 TOGARAM1Q9Y4F4 1720 aa30.25■■■□□ 2.43
ACACA-238ENST00000616352 ZNF521Q96K83 1311 aa30.25■■■□□ 2.43
ACACA-238ENST00000616352 SIPA1L3O60292 1781 aaPredicted RBP30.24■■■□□ 2.43
ACACA-238ENST00000616352 HTATSF1O43719 755 aaKnown RBP30.24■■■□□ 2.43
ACACA-238ENST00000616352 RXRBP28702 533 aa30.24■■■□□ 2.43
ACACA-238ENST00000616352 ZBED9Q6R2W3 1325 aa30.24■■■□□ 2.43
ACACA-238ENST00000616352 KAT6BQ8WYB5 2073 aa30.23■■■□□ 2.43
ACACA-238ENST00000616352 LMOD3Q0VAK6 560 aa30.23■■■□□ 2.43
ACACA-238ENST00000616352 WWC1Q8IX03 1113 aa30.23■■■□□ 2.43
ACACA-238ENST00000616352 SEPT12Q8IYM1 358 aa30.23■■■□□ 2.43
ACACA-238ENST00000616352 DDX54Q8TDD1 881 aaKnown RBP30.22■■■□□ 2.43
ACACA-238ENST00000616352 KDM6AO15550 1401 aaPredicted RBP30.22■■■□□ 2.43
ACACA-238ENST00000616352 A0A0G2JS52 829 aa30.22■■■□□ 2.43
ACACA-238ENST00000616352 MYT1Q01538 1121 aa30.22■■■□□ 2.43
ACACA-238ENST00000616352 NKX1-1Q15270 411 aaPredicted RBP30.22■■■□□ 2.43
ACACA-238ENST00000616352 ITGB4P16144 1822 aa30.21■■■□□ 2.43
ACACA-238ENST00000616352 CEMIPQ8WUJ3 1361 aa30.2■■■□□ 2.43
ACACA-238ENST00000616352 DOT1LQ8TEK3 1739 aa30.2■■■□□ 2.42
ACACA-238ENST00000616352 HSP90AB1P08238 724 aaKnown RBP30.19■■■□□ 2.42
ACACA-238ENST00000616352 DCTN1Q14203 1278 aa30.19■■■□□ 2.42
ACACA-238ENST00000616352 MARCH10Q8NA82 808 aaPredicted RBP30.19■■■□□ 2.42
ACACA-238ENST00000616352 IL17REQ8NFR9 667 aa30.19■■■□□ 2.42
ACACA-238ENST00000616352 RTF1Q92541 710 aaKnown RBP30.19■■■□□ 2.42
ACACA-238ENST00000616352 MPRIPQ6WCQ1 1025 aa30.18■■■□□ 2.42
ACACA-238ENST00000616352 MCM10Q7L590 875 aa30.18■■■□□ 2.42
ACACA-238ENST00000616352 RGS12O14924 1447 aa30.18■■■□□ 2.42
ACACA-238ENST00000616352 SBF2Q86WG5 1849 aa30.17■■■□□ 2.42
ACACA-238ENST00000616352 DCAF5Q96JK2 942 aa30.17■■■□□ 2.42
ACACA-238ENST00000616352 THUMPD2Q9BTF0 503 aaKnown RBP30.17■■■□□ 2.42
ACACA-238ENST00000616352 LGR6Q9HBX8 967 aa30.17■■■□□ 2.42
ACACA-238ENST00000616352 MRC1P22897 1456 aa30.17■■■□□ 2.42
ACACA-238ENST00000616352 RNMTO43148 476 aaKnown RBP30.15■■■□□ 2.42
ACACA-238ENST00000616352 PDE3BQ13370 1112 aa30.14■■■□□ 2.42
ACACA-238ENST00000616352 WDR63Q8IWG1 891 aa30.14■■■□□ 2.41
ACACA-238ENST00000616352 EP400Q96L91 3159 aa30.11■■■□□ 2.41
ACACA-238ENST00000616352 BCL9O00512 1426 aa30.1■■■□□ 2.41
ACACA-238ENST00000616352 KDM3BQ7LBC6 1761 aa30.1■■■□□ 2.41
ACACA-238ENST00000616352 IL16Q14005 1332 aa30.09■■■□□ 2.41
ACACA-238ENST00000616352 CALD1Q05682 793 aaKnown RBP30.08■■■□□ 2.41
ACACA-238ENST00000616352 GOLGA2Q08379 1002 aa30.07■■■□□ 2.4
ACACA-238ENST00000616352 KRT27Q7Z3Y8 459 aa30.07■■■□□ 2.4
ACACA-238ENST00000616352 ERVV-2B6SEH9 535 aa30.07■■■□□ 2.4
ACACA-238ENST00000616352 NHSQ6T4R5 1651 aa30.07■■■□□ 2.4
ACACA-238ENST00000616352 SLC52A2Q9HAB3 445 aa30.06■■■□□ 2.4
ACACA-238ENST00000616352 SPINK5Q9NQ38 1064 aaPredicted RBP30.06■■■□□ 2.4
ACACA-238ENST00000616352 PAPPAQ13219 1627 aa30.05■■■□□ 2.4
ACACA-238ENST00000616352 ZNF853P0CG23 659 aa30.04■■■□□ 2.4
ACACA-238ENST00000616352 TEFQ10587 303 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms