RNA–Protein interactions for RNA: ENST00000615544.4

ACTG1-216, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-216ENST00000615544 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
ACTG1-216ENST00000615544 NEFLP07196 543 aa16.71■□□□□ 0.27
ACTG1-216ENST00000615544 SOCS7O14512 581 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 IL2RBP14784 551 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
ACTG1-216ENST00000615544 HMOX1P09601 288 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 FKBP8Q14318 412 aa16.7■□□□□ 0.26
ACTG1-216ENST00000615544 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
ACTG1-216ENST00000615544 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
ACTG1-216ENST00000615544 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
ACTG1-216ENST00000615544 KDRP35968 1356 aa16.68■□□□□ 0.26
ACTG1-216ENST00000615544 DDB1Q16531 1140 aa16.67■□□□□ 0.26
ACTG1-216ENST00000615544 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
ACTG1-216ENST00000615544 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
ACTG1-216ENST00000615544 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
ACTG1-216ENST00000615544 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
ACTG1-216ENST00000615544 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
ACTG1-216ENST00000615544 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
ACTG1-216ENST00000615544 KRT27Q7Z3Y8 459 aa16.64■□□□□ 0.25
ACTG1-216ENST00000615544 PDE3BQ13370 1112 aa16.63■□□□□ 0.25
ACTG1-216ENST00000615544 EXOC5O00471 708 aa16.62■□□□□ 0.25
ACTG1-216ENST00000615544 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
ACTG1-216ENST00000615544 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
ACTG1-216ENST00000615544 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
ACTG1-216ENST00000615544 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
ACTG1-216ENST00000615544 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
ACTG1-216ENST00000615544 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
ACTG1-216ENST00000615544 DDX54Q8TDD1 881 aaKnown RBP16.61■□□□□ 0.25
ACTG1-216ENST00000615544 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
ACTG1-216ENST00000615544 SBF2Q86WG5 1849 aa16.6■□□□□ 0.25
ACTG1-216ENST00000615544 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
ACTG1-216ENST00000615544 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
ACTG1-216ENST00000615544 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
ACTG1-216ENST00000615544 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
ACTG1-216ENST00000615544 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.24
ACTG1-216ENST00000615544 CYP27B1O15528 508 aa16.58■□□□□ 0.24
ACTG1-216ENST00000615544 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.24
ACTG1-216ENST00000615544 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
ACTG1-216ENST00000615544 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
ACTG1-216ENST00000615544 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
ACTG1-216ENST00000615544 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
ACTG1-216ENST00000615544 FCHSD2O94868 740 aa16.56■□□□□ 0.24
ACTG1-216ENST00000615544 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
ACTG1-216ENST00000615544 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
ACTG1-216ENST00000615544 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
ACTG1-216ENST00000615544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
ACTG1-216ENST00000615544 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
ACTG1-216ENST00000615544 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
ACTG1-216ENST00000615544 NHSQ6T4R5 1651 aa16.55■□□□□ 0.24
ACTG1-216ENST00000615544 TNS1Q9HBL0 1735 aaKnown RBP16.54■□□□□ 0.24
ACTG1-216ENST00000615544 PHKG2P15735 406 aa16.54■□□□□ 0.24
ACTG1-216ENST00000615544 ITGB4P16144 1822 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 ACSBG1Q96GR2 724 aa16.53■□□□□ 0.24
ACTG1-216ENST00000615544 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
ACTG1-216ENST00000615544 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
ACTG1-216ENST00000615544 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
ACTG1-216ENST00000615544 BTAF1O14981 1849 aa16.51■□□□□ 0.23
ACTG1-216ENST00000615544 BCL9O00512 1426 aa16.51■□□□□ 0.23
ACTG1-216ENST00000615544 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 TRIM37O94972 964 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 NEFMP07197 916 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 PTF1AQ7RTS3 328 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 MPRIPQ6WCQ1 1025 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
ACTG1-216ENST00000615544 KCNQ2O43526 872 aa16.49■□□□□ 0.23
ACTG1-216ENST00000615544 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
ACTG1-216ENST00000615544 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
ACTG1-216ENST00000615544 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
ACTG1-216ENST00000615544 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
ACTG1-216ENST00000615544 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
ACTG1-216ENST00000615544 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
ACTG1-216ENST00000615544 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
ACTG1-216ENST00000615544 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
ACTG1-216ENST00000615544 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
ACTG1-216ENST00000615544 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
ACTG1-216ENST00000615544 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
ACTG1-216ENST00000615544 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
ACTG1-216ENST00000615544 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
ACTG1-216ENST00000615544 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
ACTG1-216ENST00000615544 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.221e-66■■■■■ 81.4
ACTG1-216ENST00000615544 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
ACTG1-216ENST00000615544 MRC1P22897 1456 aa16.45■□□□□ 0.22
ACTG1-216ENST00000615544 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
ACTG1-216ENST00000615544 APAF1O14727 1248 aa16.44■□□□□ 0.22
ACTG1-216ENST00000615544 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
ACTG1-216ENST00000615544 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
ACTG1-216ENST00000615544 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
ACTG1-216ENST00000615544 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
ACTG1-216ENST00000615544 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
ACTG1-216ENST00000615544 MCM10Q7L590 875 aa16.43■□□□□ 0.22
ACTG1-216ENST00000615544 RIPK4P57078 832 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms