RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
ATF3-210ENST00000613104 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
ATF3-210ENST00000613104 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
ATF3-210ENST00000613104 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
ATF3-210ENST00000613104 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
ATF3-210ENST00000613104 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
ATF3-210ENST00000613104 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
ATF3-210ENST00000613104 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
ATF3-210ENST00000613104 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
ATF3-210ENST00000613104 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
ATF3-210ENST00000613104 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
ATF3-210ENST00000613104 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
ATF3-210ENST00000613104 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
ATF3-210ENST00000613104 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
ATF3-210ENST00000613104 PARP4Q9UKK3 1724 aaKnown RBP12.42□□□□□ -0.42
ATF3-210ENST00000613104 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
ATF3-210ENST00000613104 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
ATF3-210ENST00000613104 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
ATF3-210ENST00000613104 U2AF1L5P0DN76 240 aaPredicted RBP12.41□□□□□ -0.42
ATF3-210ENST00000613104 U2AF1Q01081 240 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATF3-210ENST00000613104 AEBP1Q8IUX7 1158 aa12.41□□□□□ -0.42
ATF3-210ENST00000613104 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
ATF3-210ENST00000613104 MEGF6O75095 1541 aa12.41□□□□□ -0.42
ATF3-210ENST00000613104 FCHSD2O94868 740 aa12.4□□□□□ -0.42
ATF3-210ENST00000613104 HMOX1P09601 288 aa12.4□□□□□ -0.42
ATF3-210ENST00000613104 IL2RBP14784 551 aa12.4□□□□□ -0.42
ATF3-210ENST00000613104 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
ATF3-210ENST00000613104 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
ATF3-210ENST00000613104 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
ATF3-210ENST00000613104 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
ATF3-210ENST00000613104 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.43
ATF3-210ENST00000613104 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
ATF3-210ENST00000613104 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
ATF3-210ENST00000613104 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
ATF3-210ENST00000613104 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
ATF3-210ENST00000613104 TATP17735 454 aaPredicted RBP12.38□□□□□ -0.43
ATF3-210ENST00000613104 RXRBP28702 533 aa12.38□□□□□ -0.43
ATF3-210ENST00000613104 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
ATF3-210ENST00000613104 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
ATF3-210ENST00000613104 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
ATF3-210ENST00000613104 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
ATF3-210ENST00000613104 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
ATF3-210ENST00000613104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATF3-210ENST00000613104 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
ATF3-210ENST00000613104 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
ATF3-210ENST00000613104 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
ATF3-210ENST00000613104 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 EXOC5O00471 708 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 DSG3P32926 999 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
ATF3-210ENST00000613104 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
ATF3-210ENST00000613104 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
ATF3-210ENST00000613104 RUNDC1Q96C34 613 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 RGS12O14924 1447 aa12.34□□□□□ -0.43
ATF3-210ENST00000613104 DDB1Q16531 1140 aa12.33□□□□□ -0.44
ATF3-210ENST00000613104 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■■■ 30.7
ATF3-210ENST00000613104 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
ATF3-210ENST00000613104 NEFMP07197 916 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
ATF3-210ENST00000613104 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 DLG5Q8TDM6 1919 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
ATF3-210ENST00000613104 CYP27B1O15528 508 aa12.31□□□□□ -0.44
ATF3-210ENST00000613104 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
ATF3-210ENST00000613104 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 A0A0G2JS52 829 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 PHKG2P15735 406 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 MYT1Q01538 1121 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
ATF3-210ENST00000613104 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
ATF3-210ENST00000613104 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
ATF3-210ENST00000613104 VIRMAQ69YN4 1812 aaKnown RBP12.3□□□□□ -0.44
ATF3-210ENST00000613104 BCL9O00512 1426 aa12.29□□□□□ -0.44
ATF3-210ENST00000613104 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
ATF3-210ENST00000613104 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
ATF3-210ENST00000613104 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
ATF3-210ENST00000613104 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
ATF3-210ENST00000613104 KRT27Q7Z3Y8 459 aa12.29□□□□□ -0.44
ATF3-210ENST00000613104 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
ATF3-210ENST00000613104 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
ATF3-210ENST00000613104 APAF1O14727 1248 aa12.28□□□□□ -0.44
ATF3-210ENST00000613104 C1orf141Q5JVX7 400 aa12.28□□□□□ -0.44
ATF3-210ENST00000613104 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
ATF3-210ENST00000613104 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
ATF3-210ENST00000613104 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
ATF3-210ENST00000613104 TOGARAM1Q9Y4F4 1720 aa12.27□□□□□ -0.45
ATF3-210ENST00000613104 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
ATF3-210ENST00000613104 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
ATF3-210ENST00000613104 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
ATF3-210ENST00000613104 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
ATF3-210ENST00000613104 RIPK4P57078 832 aa12.26□□□□□ -0.45
ATF3-210ENST00000613104 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
ATF3-210ENST00000613104 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
ATF3-210ENST00000613104 RNMTO43148 476 aaKnown RBP12.25□□□□□ -0.45
ATF3-210ENST00000613104 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms