RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 POLD1P28340 1107 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 USP5P45974 858 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PPP1R14CQ8TAE6 165 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TAF12Q16514 161 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ACBD5Q5T8D3 534 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 MXRA7P84157 204 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 HDGFL2Q7Z4V5 671 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PRKG1Q13976 671 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TSC22D1Q15714 1073 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NUP133Q8WUM0 1156 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CSPG5O95196 566 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 KIF3CO14782 793 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SLC4A1P02730 911 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 LRRFIP1Q32MZ4 808 aaKnown RBP12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 STMN2Q93045 179 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TRIM55Q9BYV6 548 aa12.66□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 RFC1P35251 1148 aaPredicted RBP12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 RABEP1Q15276 862 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 AAMPQ13685 434 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 MORC4Q8TE76 937 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 MAP7D1Q3KQU3 841 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 OPA1O60313 960 aa12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 XRCC6P12956 609 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.39
CNTNAP3B-211ENST00000612828 IRAK4Q9NWZ3 460 aa12.65□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NOC2LQ9Y3T9 749 aaKnown RBP12.65□□□□□ -0.39
CNTNAP3B-211ENST00000612828 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 XBP1P17861 261 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 DPH6Q7L8W6 267 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 STK25O00506 426 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 FILIP1LQ4L180 1135 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ERC2O15083 957 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 TXLNAP40222 546 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NOL3O60936 208 aaKnown RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
CNTNAP3B-211ENST00000612828 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SWAP70Q9UH65 585 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 FRMD4BQ9Y2L6 1034 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PRR16Q569H4 304 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SPC24Q8NBT2 197 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC6Q16204 474 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
CNTNAP3B-211ENST00000612828 BCAR3O75815 825 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 GBP7Q8N8V2 638 aaPredicted RBP12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 BACH2Q9BYV9 841 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SNX16P57768 344 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 FBXW4P57775 412 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
CNTNAP3B-211ENST00000612828 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CACYBPQ9HB71 228 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms