RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SKAP1Q86WV1 359 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 GTPBP4Q9BZE4 634 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 XIRP1Q702N8 1843 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 RBM5P52756 815 aaKnown RBP eCLIP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 NKX1-1Q15270 411 aaPredicted RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 E2F5Q15329 346 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 SKIV2LQ15477 1246 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 CHPF2Q9P2E5 772 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 RGPD3A6NKT7 1758 aaPredicted RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 RGPD4Q7Z3J3 1758 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 COL24A1Q17RW2 1714 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 SF3B2Q13435 895 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 NYAP1Q6ZVC0 841 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 CADPS2Q86UW7 1296 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 PHF8Q9UPP1 1060 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 ABCC3O15438 1527 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 ARHGEF5Q12774 1597 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 A6NJR5 290 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 SUDS3Q9H7L9 328 aaPredicted RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 IVNS1ABPQ9Y6Y0 642 aa7.16□□□□□ -1.26
COL4A3BP-207ENST00000604926 CDC42BPAQ5VT25 1732 aa7.15□□□□□ -1.26
COL4A3BP-207ENST00000604926 MLH3Q9UHC1 1453 aa7.15□□□□□ -1.26
COL4A3BP-207ENST00000604926 ZNF853P0CG23 659 aa7.15□□□□□ -1.26
COL4A3BP-207ENST00000604926 TCF3P15923 654 aa7.15□□□□□ -1.26
COL4A3BP-207ENST00000604926 DPH6Q7L8W6 267 aa7.15□□□□□ -1.26
COL4A3BP-207ENST00000604926 FLT3P36888 993 aa7.15□□□□□ -1.27
COL4A3BP-207ENST00000604926 POM121Q96HA1 1249 aa7.15□□□□□ -1.27
COL4A3BP-207ENST00000604926 MKRN1Q9UHC7 482 aaKnown RBP7.15□□□□□ -1.27
COL4A3BP-207ENST00000604926 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 ABCC1P33527 1531 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 CDK13Q14004 1512 aaKnown RBP7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 ZFYVE16Q7Z3T8 1539 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 IQGAP3Q86VI3 1631 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 TGFB3P10600 412 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 UBXN4Q92575 508 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 ZBTB47Q9UFB7 747 aaPredicted RBP7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 TSPOAP1O95153 1857 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 CD151P48509 253 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 TSR1Q2NL82 804 aaKnown RBP7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 HSP90AB2PQ58FF8 381 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 C16orf87Q6PH81 154 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 LARGE2Q8N3Y3 721 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 INO80BQ9C086 356 aaPredicted RBP7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
COL4A3BP-207ENST00000604926 UGGT1Q9NYU2 1555 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 CLCN1P35523 988 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 C22orf23Q9BZE7 217 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 IQSEC3Q9UPP2 1182 aaPredicted RBP7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 YEATS2Q9ULM3 1422 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 SKILP12757 684 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 CCDC70Q6NSX1 233 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 SEZ6LQ9BYH1 1024 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 KIDINS220Q9ULH0 1771 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 G3BP2Q9UN86 482 aaKnown RBP7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 NCOA1Q15788 1441 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 SYNRGQ9UMZ2 1314 aa7.13□□□□□ -1.27
COL4A3BP-207ENST00000604926 RBM47A0AV96 593 aaKnown RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 PPP1R12AO14974 1030 aaPredicted RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 ZMYND10O75800 440 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 ABCD1P33897 745 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 BIRC2Q13490 618 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 POGZQ7Z3K3 1410 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 FLIIQ13045 1269 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 TXNDC2Q86VQ3 553 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 JADE2Q9NQC1 790 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 DIP2AQ14689 1571 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 SUPT6HQ7KZ85 1726 aaKnown RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 IPO7O95373 1038 aaKnown RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 SND1Q7KZF4 910 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 SNRNP27Q8WVK2 155 aaKnown RBP7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 NEUROD6Q96NK8 337 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 MAP3K1Q13233 1512 aa7.12□□□□□ -1.27
COL4A3BP-207ENST00000604926 PDILTQ8N807 584 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 DCAF11Q8TEB1 546 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 IPO5O00410 1097 aaKnown RBP7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 POU5F1Q01860 360 aaKnown RBP7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 AGBL1Q96MI9 1066 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 EFCC1Q9HA90 598 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 LRRC9Q6ZRR7 1453 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 RAPGEF2Q9Y4G8 1499 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 VWDEQ8N2E2 1590 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 TRIM6-TRIM34B2RNG4 842 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 EIF3JO75822 258 aaKnown RBP7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 DNAJC21Q5F1R6 531 aaKnown RBP7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 TRIM34Q9BYJ4 488 aa7.11□□□□□ -1.27
COL4A3BP-207ENST00000604926 KIF16BQ96L93 1317 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 CTAGE5O15320 804 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 ITGAEP38570 1179 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 FAM161AQ3B820 660 aa7.1□□□□□ -1.27
COL4A3BP-207ENST00000604926 NCAPGQ9BPX3 1015 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms