RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 GEMIN8Q9NWZ8 242 aaKnown RBP8.73□□□□□ -1.01
TUBE1-207ENST00000604689 CEP83Q9Y592 693 aa8.73□□□□□ -1.01
TUBE1-207ENST00000604689 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 NME8Q8N427 588 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 ZSWIM4Q9H7M6 989 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 HIC1Q14526 733 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 PDIA6Q15084 440 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 QPCTQ16769 361 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 U2AF1L5P0DN76 240 aaPredicted RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 DNAJA1P31689 397 aaKnown RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 GTF2A1P52655 376 aaPredicted RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 U2AF1Q01081 240 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■□□□□ 10.4
TUBE1-207ENST00000604689 L1TD1Q5T7N2 865 aaKnown RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
TUBE1-207ENST00000604689 POGKQ9P215 609 aa8.72□□□□□ -1.01
TUBE1-207ENST00000604689 CCDC94Q9BW85 323 aaPredicted RBP8.71□□□□□ -1.01
TUBE1-207ENST00000604689 LETM1O95202 739 aaPredicted RBP8.71□□□□□ -1.02
TUBE1-207ENST00000604689 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
TUBE1-207ENST00000604689 TTC30BQ8N4P2 665 aa8.71□□□□□ -1.02
TUBE1-207ENST00000604689 RMI1Q9H9A7 625 aa8.71□□□□□ -1.02
TUBE1-207ENST00000604689 IGBP1P78318 339 aa8.71□□□□□ -1.02
TUBE1-207ENST00000604689 TCEAL1Q15170 157 aa8.71□□□□□ -1.02
TUBE1-207ENST00000604689 UTP14CQ5TAP6 766 aaKnown RBP8.71□□□□□ -1.02
TUBE1-207ENST00000604689 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
TUBE1-207ENST00000604689 PTPROQ16827 1216 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 MYCBPQ99417 103 aaPredicted RBP8.7□□□□□ -1.02
TUBE1-207ENST00000604689 CHPF2Q9P2E5 772 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 PHLDB1Q86UU1 1377 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 PRKAG2Q9UGJ0 569 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 ABCA9Q8IUA7 1624 aa8.7□□□□□ -1.02
TUBE1-207ENST00000604689 SLFNL1Q499Z3 407 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
TUBE1-207ENST00000604689 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 MAP3K1Q13233 1512 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 CREB3O43889 395 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 LGR5O75473 907 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
TUBE1-207ENST00000604689 PSME1Q06323 249 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 BMS1Q14692 1282 aaKnown RBP8.69□□□□□ -1.02
TUBE1-207ENST00000604689 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 MS4A4AQ96JQ5 239 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 CROCC2H7BZ55 1655 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 ARHGEF11O15085 1522 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 HELBQ8NG08 1087 aaPredicted RBP8.69□□□□□ -1.02
TUBE1-207ENST00000604689 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 PRR12Q9ULL5 1215 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
TUBE1-207ENST00000604689 PPFIA4O75335 1185 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 MSL3Q8N5Y2 521 aaKnown RBP8.68□□□□□ -1.02
TUBE1-207ENST00000604689 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 EFCAB5A4FU69 1503 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 NLRP6P59044 892 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 STK11IPQ8N1F8 1099 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 MRPL42Q9Y6G3 142 aaKnown RBP8.68□□□□□ -1.02
TUBE1-207ENST00000604689 PRXQ9BXM0 1461 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 KIAA0556O60303 1618 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 CCT2P78371 535 aaKnown RBP8.68□□□□□ -1.02
TUBE1-207ENST00000604689 RPS6KL1Q9Y6S9 549 aa8.68□□□□□ -1.02
TUBE1-207ENST00000604689 SYNJ2O15056 1496 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 ABL1P00519 1130 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 TPM3P06753 285 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 ZNF853P0CG23 659 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 HDLBPQ00341 1268 aaKnown RBP8.67□□□□□ -1.02
TUBE1-207ENST00000604689 CT47A1Q5JQC4 288 aaPredicted RBP8.67□□□□□ -1.02
TUBE1-207ENST00000604689 LRCH2Q5VUJ6 765 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 CCDC194A0A1B0GVG4 234 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 C7P10643 843 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 NEXNQ0ZGT2 675 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
TUBE1-207ENST00000604689 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 ARL10Q8N8L6 244 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
TUBE1-207ENST00000604689 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
TUBE1-207ENST00000604689 CCDC172P0C7W6 258 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 ZNF211Q13398 564 aaPredicted RBP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 SDE2Q6IQ49 451 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 UPF1Q92900 1129 aaKnown RBP eCLIP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 EGFLAMQ63HQ2 1017 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 TMX1Q9H3N1 280 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 RAI14Q9P0K7 980 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 METTL14Q9HCE5 456 aaKnown RBP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
TUBE1-207ENST00000604689 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
TUBE1-207ENST00000604689 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.02
TUBE1-207ENST00000604689 OSBPP22059 807 aa8.65□□□□□ -1.02
TUBE1-207ENST00000604689 JAZF1Q86VZ6 243 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms