RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SOX12O15370 315 aa15.79■□□□□ 0.12
CHMP2A-207ENST00000600804 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-207ENST00000600804 CARD10Q9BWT7 1032 aa15.79■□□□□ 0.12
CHMP2A-207ENST00000600804 MAP2P11137 1827 aaKnown RBP15.79■□□□□ 0.12
CHMP2A-207ENST00000600804 TXNRD1Q16881 649 aa15.78■□□□□ 0.12
CHMP2A-207ENST00000600804 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.12
CHMP2A-207ENST00000600804 ANP32CO43423 234 aa15.77■□□□□ 0.12
CHMP2A-207ENST00000600804 SGIP1Q9BQI5 828 aa15.77■□□□□ 0.12
CHMP2A-207ENST00000600804 LY75O60449 1722 aa15.77■□□□□ 0.11
CHMP2A-207ENST00000600804 DOT1LQ8TEK3 1739 aa15.77■□□□□ 0.11
CHMP2A-207ENST00000600804 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
CHMP2A-207ENST00000600804 FAM208AQ9UK61 1670 aaKnown RBP15.76■□□□□ 0.11
CHMP2A-207ENST00000600804 SLC15A2Q16348 729 aa15.75■□□□□ 0.11
CHMP2A-207ENST00000600804 CDCA7Q9BWT1 371 aaPredicted RBP15.75■□□□□ 0.11
CHMP2A-207ENST00000600804 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
CHMP2A-207ENST00000600804 INSRP06213 1382 aa15.74■□□□□ 0.11
CHMP2A-207ENST00000600804 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
CHMP2A-207ENST00000600804 PPP2R1AP30153 589 aa15.73■□□□□ 0.11
CHMP2A-207ENST00000600804 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
CHMP2A-207ENST00000600804 ERBB3P21860 1342 aa15.72■□□□□ 0.11
CHMP2A-207ENST00000600804 CSB-PGBD3P0DP91 1061 aa15.72■□□□□ 0.11
CHMP2A-207ENST00000600804 ACSBG1Q96GR2 724 aa15.72■□□□□ 0.11
CHMP2A-207ENST00000600804 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
CHMP2A-207ENST00000600804 FHDC1Q9C0D6 1143 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-207ENST00000600804 MAP3K19Q56UN5 1328 aa15.71■□□□□ 0.11
CHMP2A-207ENST00000600804 EXOC5O00471 708 aa15.71■□□□□ 0.11
CHMP2A-207ENST00000600804 STK32BQ9NY57 414 aa15.71■□□□□ 0.11
CHMP2A-207ENST00000600804 FLT4P35916 1363 aa15.71■□□□□ 0.11
CHMP2A-207ENST00000600804 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
CHMP2A-207ENST00000600804 IP6K1Q92551 441 aa15.7■□□□□ 0.1
CHMP2A-207ENST00000600804 RRS1Q15050 365 aaKnown RBP15.69■□□□□ 0.1
CHMP2A-207ENST00000600804 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
CHMP2A-207ENST00000600804 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
CHMP2A-207ENST00000600804 FBLN1P23142 703 aa15.68■□□□□ 0.1
CHMP2A-207ENST00000600804 TNNT2P45379 298 aaPredicted RBP15.68■□□□□ 0.1
CHMP2A-207ENST00000600804 MTHFSP49914 203 aa15.68■□□□□ 0.1
CHMP2A-207ENST00000600804 LRRC4BQ9NT99 713 aa15.68■□□□□ 0.1
CHMP2A-207ENST00000600804 EMILIN1Q9Y6C2 1016 aa15.68■□□□□ 0.1
CHMP2A-207ENST00000600804 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
CHMP2A-207ENST00000600804 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
CHMP2A-207ENST00000600804 HOXC9P31274 260 aa15.67■□□□□ 0.1
CHMP2A-207ENST00000600804 AMPHP49418 695 aa15.66■□□□□ 0.1
CHMP2A-207ENST00000600804 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
CHMP2A-207ENST00000600804 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
CHMP2A-207ENST00000600804 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
CHMP2A-207ENST00000600804 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
CHMP2A-207ENST00000600804 NLRP2Q9NX02 1062 aa15.65■□□□□ 0.1
CHMP2A-207ENST00000600804 CEP350Q5VT06 3117 aa15.64■□□□□ 0.09
CHMP2A-207ENST00000600804 IL2RBP14784 551 aa15.64■□□□□ 0.09
CHMP2A-207ENST00000600804 ANKRD24Q8TF21 1146 aa15.64■□□□□ 0.09
CHMP2A-207ENST00000600804 CFAP53Q96M91 514 aa15.64■□□□□ 0.09
CHMP2A-207ENST00000600804 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
CHMP2A-207ENST00000600804 ARXQ96QS3 562 aa15.63■□□□□ 0.09
CHMP2A-207ENST00000600804 C5P01031 1676 aa15.63■□□□□ 0.09
CHMP2A-207ENST00000600804 ITGB4P16144 1822 aa15.62■□□□□ 0.09
CHMP2A-207ENST00000600804 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
CHMP2A-207ENST00000600804 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
CHMP2A-207ENST00000600804 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
CHMP2A-207ENST00000600804 MEGF6O75095 1541 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 IL13P35225 146 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 KCNQ4P56696 695 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 MIER1Q8N108 512 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
CHMP2A-207ENST00000600804 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
CHMP2A-207ENST00000600804 EIF4A2Q14240 407 aaKnown RBP15.59■□□□□ 0.09
CHMP2A-207ENST00000600804 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
CHMP2A-207ENST00000600804 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
CHMP2A-207ENST00000600804 DDX54Q8TDD1 881 aaKnown RBP15.56■□□□□ 0.08
CHMP2A-207ENST00000600804 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
CHMP2A-207ENST00000600804 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
CHMP2A-207ENST00000600804 UBR3Q6ZT12 1888 aa15.56■□□□□ 0.08
CHMP2A-207ENST00000600804 KDRP35968 1356 aa15.55■□□□□ 0.08
CHMP2A-207ENST00000600804 NLGN2Q8NFZ4 835 aa15.55■□□□□ 0.08
CHMP2A-207ENST00000600804 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
CHMP2A-207ENST00000600804 LTV1Q96GA3 475 aaPredicted RBP15.55■□□□□ 0.08
CHMP2A-207ENST00000600804 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
CHMP2A-207ENST00000600804 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
CHMP2A-207ENST00000600804 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
CHMP2A-207ENST00000600804 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
CHMP2A-207ENST00000600804 SLC27A3Q5K4L6 730 aa15.53■□□□□ 0.08
CHMP2A-207ENST00000600804 EYA1Q99502 592 aa15.53■□□□□ 0.08
CHMP2A-207ENST00000600804 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.08
CHMP2A-207ENST00000600804 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.08
CHMP2A-207ENST00000600804 SLC16A10Q8TF71 515 aa15.52■□□□□ 0.08
CHMP2A-207ENST00000600804 NBPF4Q96M43 638 aa15.52■□□□□ 0.08
CHMP2A-207ENST00000600804 FCHSD2O94868 740 aa15.51■□□□□ 0.07
CHMP2A-207ENST00000600804 KLHL34Q8N239 644 aa15.51■□□□□ 0.07
CHMP2A-207ENST00000600804 C4BP0C0L5 1744 aa15.51■□□□□ 0.07
CHMP2A-207ENST00000600804 GPR162Q16538 588 aa15.5■□□□□ 0.07
CHMP2A-207ENST00000600804 SYTL4Q96C24 671 aaPredicted RBP15.5■□□□□ 0.07
CHMP2A-207ENST00000600804 YBX3P16989 372 aaKnown RBP eCLIP15.49■□□□□ 0.075e-16■□□□□ 9
CHMP2A-207ENST00000600804 WDR43Q15061 677 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHMP2A-207ENST00000600804 PNNQ9H307 717 aaKnown RBP15.49■□□□□ 0.07
CHMP2A-207ENST00000600804 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 COL23A1Q86Y22 540 aaPredicted RBP15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 USHBP1Q8N6Y0 703 aa15.48■□□□□ 0.07
CHMP2A-207ENST00000600804 ZCRB1Q8TBF4 217 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms