RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
ZNF548-203ENST00000594668 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
ZNF548-203ENST00000594668 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-203ENST00000594668 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
ZNF548-203ENST00000594668 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
ZNF548-203ENST00000594668 A0A0G2JS52 829 aa12.39□□□□□ -0.43
ZNF548-203ENST00000594668 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
ZNF548-203ENST00000594668 FCHSD2O94868 740 aa12.39□□□□□ -0.43
ZNF548-203ENST00000594668 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
ZNF548-203ENST00000594668 MYT1Q01538 1121 aa12.39□□□□□ -0.43
ZNF548-203ENST00000594668 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
ZNF548-203ENST00000594668 EXOC5O00471 708 aa12.38□□□□□ -0.43
ZNF548-203ENST00000594668 PRKAR2BP31323 418 aa12.38□□□□□ -0.43
ZNF548-203ENST00000594668 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF548-203ENST00000594668 DDB1Q16531 1140 aa12.38□□□□□ -0.43
ZNF548-203ENST00000594668 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
ZNF548-203ENST00000594668 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
ZNF548-203ENST00000594668 PHACTR3Q96KR7 559 aa12.37□□□□□ -0.43
ZNF548-203ENST00000594668 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
ZNF548-203ENST00000594668 PDE3BQ13370 1112 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
ZNF548-203ENST00000594668 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
ZNF548-203ENST00000594668 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 CCDC146Q8IYE0 955 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
ZNF548-203ENST00000594668 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
ZNF548-203ENST00000594668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
ZNF548-203ENST00000594668 TNS2Q63HR2 1409 aa12.35□□□□□ -0.43
ZNF548-203ENST00000594668 ITGB4P16144 1822 aa12.34□□□□□ -0.43
ZNF548-203ENST00000594668 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
ZNF548-203ENST00000594668 CYP27B1O15528 508 aa12.34□□□□□ -0.43
ZNF548-203ENST00000594668 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
ZNF548-203ENST00000594668 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
ZNF548-203ENST00000594668 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
ZNF548-203ENST00000594668 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
ZNF548-203ENST00000594668 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 PHKG2P15735 406 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-203ENST00000594668 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
ZNF548-203ENST00000594668 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
ZNF548-203ENST00000594668 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
ZNF548-203ENST00000594668 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-203ENST00000594668 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
ZNF548-203ENST00000594668 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
ZNF548-203ENST00000594668 MAPK8IP3Q9UPT6 1336 aa12.3□□□□□ -0.44
ZNF548-203ENST00000594668 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 APAF1O14727 1248 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 NEFMP07197 916 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 EP400Q96L91 3159 aa12.29□□□□□ -0.44
ZNF548-203ENST00000594668 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-203ENST00000594668 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
ZNF548-203ENST00000594668 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
ZNF548-203ENST00000594668 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
ZNF548-203ENST00000594668 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
ZNF548-203ENST00000594668 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-203ENST00000594668 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 RIPK4P57078 832 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 PTF1AQ7RTS3 328 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 BTAF1O14981 1849 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 BCL9O00512 1426 aa12.27□□□□□ -0.45
ZNF548-203ENST00000594668 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
ZNF548-203ENST00000594668 KCNQ2O43526 872 aa12.26□□□□□ -0.45
ZNF548-203ENST00000594668 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
ZNF548-203ENST00000594668 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
ZNF548-203ENST00000594668 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
ZNF548-203ENST00000594668 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
ZNF548-203ENST00000594668 TRIM37O94972 964 aa12.25□□□□□ -0.45
ZNF548-203ENST00000594668 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
ZNF548-203ENST00000594668 MCM10Q7L590 875 aa12.25□□□□□ -0.45
ZNF548-203ENST00000594668 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
ZNF548-203ENST00000594668 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
ZNF548-203ENST00000594668 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
ZNF548-203ENST00000594668 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
ZNF548-203ENST00000594668 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
ZNF548-203ENST00000594668 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
ZNF548-203ENST00000594668 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
ZNF548-203ENST00000594668 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
ZNF548-203ENST00000594668 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
ZNF548-203ENST00000594668 PIGBQ92521 554 aa12.22□□□□□ -0.45
ZNF548-203ENST00000594668 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
ZNF548-203ENST00000594668 CABP4P57796 275 aa12.21□□□□□ -0.45
ZNF548-203ENST00000594668 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
ZNF548-203ENST00000594668 MRC1P22897 1456 aa12.21□□□□□ -0.46
ZNF548-203ENST00000594668 LY75O60449 1722 aa12.2□□□□□ -0.46
ZNF548-203ENST00000594668 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
ZNF548-203ENST00000594668 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms