RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.44
VMP1-217ENST00000593168 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
VMP1-217ENST00000593168 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
VMP1-217ENST00000593168 FLT4P35916 1363 aa17.82■□□□□ 0.44
VMP1-217ENST00000593168 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
VMP1-217ENST00000593168 SOX12O15370 315 aa17.82■□□□□ 0.44
VMP1-217ENST00000593168 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
VMP1-217ENST00000593168 PNNQ9H307 717 aaKnown RBP17.82■□□□□ 0.44
VMP1-217ENST00000593168 RGPD5Q99666 1765 aa17.81■□□□□ 0.44
VMP1-217ENST00000593168 PTF1AQ7RTS3 328 aa17.81■□□□□ 0.44
VMP1-217ENST00000593168 RUNDC1Q96C34 613 aa17.81■□□□□ 0.44
VMP1-217ENST00000593168 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
VMP1-217ENST00000593168 PLSCR1O15162 318 aa17.8■□□□□ 0.44
VMP1-217ENST00000593168 AMPHP49418 695 aa17.8■□□□□ 0.44
VMP1-217ENST00000593168 NFAT5O94916 1531 aa17.8■□□□□ 0.44
VMP1-217ENST00000593168 FCHSD2O94868 740 aa17.79■□□□□ 0.44
VMP1-217ENST00000593168 DDB1Q16531 1140 aa17.79■□□□□ 0.44
VMP1-217ENST00000593168 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
VMP1-217ENST00000593168 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
VMP1-217ENST00000593168 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
VMP1-217ENST00000593168 APAF1O14727 1248 aa17.78■□□□□ 0.44
VMP1-217ENST00000593168 HOXC9P31274 260 aa17.78■□□□□ 0.44
VMP1-217ENST00000593168 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
VMP1-217ENST00000593168 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
VMP1-217ENST00000593168 PDGFDQ9GZP0 370 aaPredicted RBP17.78■□□□□ 0.44
VMP1-217ENST00000593168 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
VMP1-217ENST00000593168 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
VMP1-217ENST00000593168 IP6K1Q92551 441 aa17.77■□□□□ 0.44
VMP1-217ENST00000593168 BCL11BQ9C0K0 894 aaPredicted RBP17.77■□□□□ 0.44
VMP1-217ENST00000593168 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
VMP1-217ENST00000593168 PROM2Q8N271 834 aa17.76■□□□□ 0.43
VMP1-217ENST00000593168 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
VMP1-217ENST00000593168 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
VMP1-217ENST00000593168 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
VMP1-217ENST00000593168 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
VMP1-217ENST00000593168 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
VMP1-217ENST00000593168 LTN1O94822 1766 aa17.74■□□□□ 0.43
VMP1-217ENST00000593168 BCL9O00512 1426 aa17.73■□□□□ 0.43
VMP1-217ENST00000593168 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
VMP1-217ENST00000593168 ZBTB7AO95365 584 aa17.73■□□□□ 0.43
VMP1-217ENST00000593168 SALL2Q9Y467 1007 aaPredicted RBP17.73■□□□□ 0.43
VMP1-217ENST00000593168 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
VMP1-217ENST00000593168 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
VMP1-217ENST00000593168 NEFMP07197 916 aa17.71■□□□□ 0.43
VMP1-217ENST00000593168 PTGER2P43116 358 aa17.71■□□□□ 0.43
VMP1-217ENST00000593168 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
VMP1-217ENST00000593168 HMOX1P09601 288 aa17.7■□□□□ 0.42
VMP1-217ENST00000593168 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
VMP1-217ENST00000593168 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
VMP1-217ENST00000593168 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
VMP1-217ENST00000593168 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
VMP1-217ENST00000593168 CDCA7Q9BWT1 371 aaPredicted RBP17.69■□□□□ 0.42
VMP1-217ENST00000593168 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
VMP1-217ENST00000593168 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
VMP1-217ENST00000593168 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
VMP1-217ENST00000593168 EYA1Q99502 592 aa17.68■□□□□ 0.42
VMP1-217ENST00000593168 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
VMP1-217ENST00000593168 KDRP35968 1356 aa17.67■□□□□ 0.42
VMP1-217ENST00000593168 UTRNP46939 3433 aa17.67■□□□□ 0.42
VMP1-217ENST00000593168 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
VMP1-217ENST00000593168 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
VMP1-217ENST00000593168 ABCC6O95255 1503 aa17.67■□□□□ 0.42
VMP1-217ENST00000593168 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
VMP1-217ENST00000593168 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
VMP1-217ENST00000593168 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
VMP1-217ENST00000593168 CHD4Q14839 1912 aa17.65■□□□□ 0.42
VMP1-217ENST00000593168 EXOC5O00471 708 aa17.65■□□□□ 0.42
VMP1-217ENST00000593168 AEBP1Q8IUX7 1158 aa17.65■□□□□ 0.42
VMP1-217ENST00000593168 WDR63Q8IWG1 891 aa17.65■□□□□ 0.42
VMP1-217ENST00000593168 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
VMP1-217ENST00000593168 FHDC1Q9C0D6 1143 aaPredicted RBP17.65■□□□□ 0.42
VMP1-217ENST00000593168 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
VMP1-217ENST00000593168 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
VMP1-217ENST00000593168 TNS2Q63HR2 1409 aa17.64■□□□□ 0.42
VMP1-217ENST00000593168 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
VMP1-217ENST00000593168 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
VMP1-217ENST00000593168 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
VMP1-217ENST00000593168 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
VMP1-217ENST00000593168 SGIP1Q9BQI5 828 aa17.64■□□□□ 0.41
VMP1-217ENST00000593168 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
VMP1-217ENST00000593168 RIPK4P57078 832 aa17.63■□□□□ 0.41
VMP1-217ENST00000593168 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
VMP1-217ENST00000593168 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
VMP1-217ENST00000593168 BTAF1O14981 1849 aa17.63■□□□□ 0.41
VMP1-217ENST00000593168 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
VMP1-217ENST00000593168 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
VMP1-217ENST00000593168 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
VMP1-217ENST00000593168 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
VMP1-217ENST00000593168 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
VMP1-217ENST00000593168 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
VMP1-217ENST00000593168 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
VMP1-217ENST00000593168 E9PSI1 815 aa17.6■□□□□ 0.41
VMP1-217ENST00000593168 ERBB3P21860 1342 aa17.6■□□□□ 0.41
VMP1-217ENST00000593168 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
VMP1-217ENST00000593168 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
VMP1-217ENST00000593168 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
VMP1-217ENST00000593168 IL16Q14005 1332 aa17.57■□□□□ 0.4
VMP1-217ENST00000593168 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
VMP1-217ENST00000593168 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
VMP1-217ENST00000593168 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms