RNA–Protein interactions for RNA: ENST00000592323.5

GRN-219, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-219ENST00000592323 RGPD2P0DJD1 1756 aa20.65■□□□□ 0.9
GRN-219ENST00000592323 U2SURPO15042 1029 aaKnown RBP20.65■□□□□ 0.9
GRN-219ENST00000592323 U2AF1L5P0DN76 240 aaPredicted RBP20.65■□□□□ 0.9
GRN-219ENST00000592323 U2AF1Q01081 240 aaKnown RBP eCLIP20.65■□□□□ 0.9
GRN-219ENST00000592323 UTRNP46939 3433 aa20.64■□□□□ 0.89
GRN-219ENST00000592323 CRB1P82279 1406 aa20.64■□□□□ 0.89
GRN-219ENST00000592323 FCHSD2O94868 740 aa20.64■□□□□ 0.89
GRN-219ENST00000592323 STRN4Q9NRL3 753 aa20.64■□□□□ 0.89
GRN-219ENST00000592323 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
GRN-219ENST00000592323 EVA1CP58658 441 aa20.63■□□□□ 0.89
GRN-219ENST00000592323 CARD10Q9BWT7 1032 aa20.63■□□□□ 0.89
GRN-219ENST00000592323 RSPH6AQ9H0K4 717 aa20.63■□□□□ 0.89
GRN-219ENST00000592323 PARP4Q9UKK3 1724 aaKnown RBP20.63■□□□□ 0.89
GRN-219ENST00000592323 YY1P25490 414 aa20.62■□□□□ 0.89
GRN-219ENST00000592323 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
GRN-219ENST00000592323 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
GRN-219ENST00000592323 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 PDE3BQ13370 1112 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 NBPF14Q5TI25 921 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 SULT6B1Q6IMI4 303 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 RGPD3A6NKT7 1758 aaPredicted RBP20.61■□□□□ 0.89
GRN-219ENST00000592323 RGPD4Q7Z3J3 1758 aa20.61■□□□□ 0.89
GRN-219ENST00000592323 TOM1L2Q6ZVM7 507 aa20.6■□□□□ 0.89
GRN-219ENST00000592323 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
GRN-219ENST00000592323 PLEKHF1Q96S99 279 aa20.6■□□□□ 0.89
GRN-219ENST00000592323 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
GRN-219ENST00000592323 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
GRN-219ENST00000592323 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
GRN-219ENST00000592323 HMOX1P09601 288 aa20.58■□□□□ 0.89
GRN-219ENST00000592323 TCP11L2Q8N4U5 519 aa20.58■□□□□ 0.89
GRN-219ENST00000592323 THRAP3Q9Y2W1 955 aaKnown RBP20.58■□□□□ 0.89
GRN-219ENST00000592323 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
GRN-219ENST00000592323 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
GRN-219ENST00000592323 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
GRN-219ENST00000592323 PRKAR2BP31323 418 aa20.56■□□□□ 0.88
GRN-219ENST00000592323 KCNQ2O43526 872 aa20.55■□□□□ 0.88
GRN-219ENST00000592323 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
GRN-219ENST00000592323 MEGF6O75095 1541 aa20.53■□□□□ 0.88
GRN-219ENST00000592323 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
GRN-219ENST00000592323 WNK3Q9BYP7 1800 aa20.52■□□□□ 0.88
GRN-219ENST00000592323 OVOS2A0A0G2JMS6 1433 aa20.52■□□□□ 0.87
GRN-219ENST00000592323 PLSCR1O15162 318 aa20.51■□□□□ 0.87
GRN-219ENST00000592323 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
GRN-219ENST00000592323 RAPGEF4Q8WZA2 1011 aa20.51■□□□□ 0.87
GRN-219ENST00000592323 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
GRN-219ENST00000592323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
GRN-219ENST00000592323 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
GRN-219ENST00000592323 IL2RBP14784 551 aa20.5■□□□□ 0.87
GRN-219ENST00000592323 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
GRN-219ENST00000592323 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
GRN-219ENST00000592323 PKD1L3Q7Z443 1732 aa20.5■□□□□ 0.87
GRN-219ENST00000592323 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
GRN-219ENST00000592323 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
GRN-219ENST00000592323 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
GRN-219ENST00000592323 NEFMP07197 916 aa20.48■□□□□ 0.87
GRN-219ENST00000592323 DCAF8L1A6NGE4 600 aa20.47■□□□□ 0.87
GRN-219ENST00000592323 APAF1O14727 1248 aa20.47■□□□□ 0.87
GRN-219ENST00000592323 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
GRN-219ENST00000592323 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
GRN-219ENST00000592323 TMPOP42166 694 aaKnown RBP20.46■□□□□ 0.87
GRN-219ENST00000592323 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
GRN-219ENST00000592323 MTHFSDQ2M296 383 aaKnown RBP20.46■□□□□ 0.87
GRN-219ENST00000592323 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
GRN-219ENST00000592323 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
GRN-219ENST00000592323 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
GRN-219ENST00000592323 BCL9O00512 1426 aa20.44■□□□□ 0.86
GRN-219ENST00000592323 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
GRN-219ENST00000592323 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
GRN-219ENST00000592323 SHANK3Q9BYB0 1731 aa20.43■□□□□ 0.86
GRN-219ENST00000592323 PROM2Q8N271 834 aa20.42■□□□□ 0.86
GRN-219ENST00000592323 ZCRB1Q8TBF4 217 aaKnown RBP20.42■□□□□ 0.86
GRN-219ENST00000592323 TNS2Q63HR2 1409 aa20.42■□□□□ 0.86
GRN-219ENST00000592323 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
GRN-219ENST00000592323 DDB1Q16531 1140 aa20.41■□□□□ 0.86
GRN-219ENST00000592323 RIPK4P57078 832 aa20.4■□□□□ 0.86
GRN-219ENST00000592323 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
GRN-219ENST00000592323 CHD4Q14839 1912 aa20.4■□□□□ 0.86
GRN-219ENST00000592323 PTF1AQ7RTS3 328 aa20.4■□□□□ 0.86
GRN-219ENST00000592323 DLG5Q8TDM6 1919 aa20.4■□□□□ 0.86
GRN-219ENST00000592323 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
GRN-219ENST00000592323 MAP3K5Q99683 1374 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 PTGER2P43116 358 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
GRN-219ENST00000592323 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
GRN-219ENST00000592323 RRP7AQ9Y3A4 280 aaKnown RBP20.39■□□□□ 0.85
GRN-219ENST00000592323 EXOC5O00471 708 aa20.38■□□□□ 0.85
GRN-219ENST00000592323 CYP27B1O15528 508 aa20.38■□□□□ 0.85
GRN-219ENST00000592323 PHKG2P15735 406 aa20.38■□□□□ 0.85
GRN-219ENST00000592323 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
GRN-219ENST00000592323 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
GRN-219ENST00000592323 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
GRN-219ENST00000592323 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
GRN-219ENST00000592323 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
GRN-219ENST00000592323 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
GRN-219ENST00000592323 MARCH10Q8NA82 808 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms