RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
KDM4B-209ENST00000592159 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
KDM4B-209ENST00000592159 NME9Q86XW9 330 aa13.05□□□□□ -0.32
KDM4B-209ENST00000592159 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
KDM4B-209ENST00000592159 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
KDM4B-209ENST00000592159 ANKRD24Q8TF21 1146 aa13.05□□□□□ -0.32
KDM4B-209ENST00000592159 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
KDM4B-209ENST00000592159 GPR162Q16538 588 aa13.04□□□□□ -0.32
KDM4B-209ENST00000592159 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
KDM4B-209ENST00000592159 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
KDM4B-209ENST00000592159 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
KDM4B-209ENST00000592159 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
KDM4B-209ENST00000592159 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
KDM4B-209ENST00000592159 POLD1P28340 1107 aa13.02□□□□□ -0.33
KDM4B-209ENST00000592159 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
KDM4B-209ENST00000592159 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
KDM4B-209ENST00000592159 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
KDM4B-209ENST00000592159 ERBB3P21860 1342 aa13.02□□□□□ -0.33
KDM4B-209ENST00000592159 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
KDM4B-209ENST00000592159 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
KDM4B-209ENST00000592159 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
KDM4B-209ENST00000592159 NSD2O96028 1365 aa13.01□□□□□ -0.33
KDM4B-209ENST00000592159 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
KDM4B-209ENST00000592159 NFAT5O94916 1531 aa13.01□□□□□ -0.33
KDM4B-209ENST00000592159 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
KDM4B-209ENST00000592159 ZNF827Q17R98 1081 aa13□□□□□ -0.33
KDM4B-209ENST00000592159 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
KDM4B-209ENST00000592159 TFCP2L1Q9NZI6 479 aa13□□□□□ -0.33
KDM4B-209ENST00000592159 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
KDM4B-209ENST00000592159 FYB1O15117 783 aa12.99□□□□□ -0.33
KDM4B-209ENST00000592159 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
KDM4B-209ENST00000592159 IP6K1Q92551 441 aa12.99□□□□□ -0.33
KDM4B-209ENST00000592159 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
KDM4B-209ENST00000592159 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 AMPHP49418 695 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
KDM4B-209ENST00000592159 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
KDM4B-209ENST00000592159 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 CHD4Q14839 1912 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 ABCC6O95255 1503 aa12.97□□□□□ -0.33
KDM4B-209ENST00000592159 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
KDM4B-209ENST00000592159 KCNQ4P56696 695 aa12.96□□□□□ -0.33
KDM4B-209ENST00000592159 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
KDM4B-209ENST00000592159 COG3Q96JB2 828 aa12.96□□□□□ -0.33
KDM4B-209ENST00000592159 BTAF1O14981 1849 aa12.95□□□□□ -0.34
KDM4B-209ENST00000592159 LTN1O94822 1766 aa12.95□□□□□ -0.34
KDM4B-209ENST00000592159 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
KDM4B-209ENST00000592159 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
KDM4B-209ENST00000592159 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
KDM4B-209ENST00000592159 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
KDM4B-209ENST00000592159 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
KDM4B-209ENST00000592159 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
KDM4B-209ENST00000592159 MTHFSP49914 203 aa12.93□□□□□ -0.34
KDM4B-209ENST00000592159 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
KDM4B-209ENST00000592159 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
KDM4B-209ENST00000592159 FBLN1P23142 703 aa12.92□□□□□ -0.34
KDM4B-209ENST00000592159 HOXC9P31274 260 aa12.92□□□□□ -0.34
KDM4B-209ENST00000592159 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
KDM4B-209ENST00000592159 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
KDM4B-209ENST00000592159 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
KDM4B-209ENST00000592159 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.34
KDM4B-209ENST00000592159 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
KDM4B-209ENST00000592159 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
KDM4B-209ENST00000592159 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
KDM4B-209ENST00000592159 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
KDM4B-209ENST00000592159 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
KDM4B-209ENST00000592159 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
KDM4B-209ENST00000592159 UTRNP46939 3433 aa12.87□□□□□ -0.35
KDM4B-209ENST00000592159 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
KDM4B-209ENST00000592159 FLAD1Q8NFF5 587 aa12.86□□□□□ -0.35
KDM4B-209ENST00000592159 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
KDM4B-209ENST00000592159 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
KDM4B-209ENST00000592159 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
KDM4B-209ENST00000592159 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
KDM4B-209ENST00000592159 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
KDM4B-209ENST00000592159 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
KDM4B-209ENST00000592159 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
KDM4B-209ENST00000592159 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
KDM4B-209ENST00000592159 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
KDM4B-209ENST00000592159 QSER1Q2KHR3 1735 aa12.84□□□□□ -0.35
KDM4B-209ENST00000592159 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.35
KDM4B-209ENST00000592159 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
KDM4B-209ENST00000592159 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
KDM4B-209ENST00000592159 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
KDM4B-209ENST00000592159 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
KDM4B-209ENST00000592159 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
KDM4B-209ENST00000592159 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
KDM4B-209ENST00000592159 RGPD2P0DJD1 1756 aa12.82□□□□□ -0.36
KDM4B-209ENST00000592159 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
KDM4B-209ENST00000592159 SMARCC1Q92922 1105 aaPredicted RBP12.82□□□□□ -0.36
KDM4B-209ENST00000592159 AK7Q96M32 723 aa12.82□□□□□ -0.36
KDM4B-209ENST00000592159 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
KDM4B-209ENST00000592159 MEGF6O75095 1541 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms