RNA–Protein interactions for RNA: ENST00000591620.1

TREM1-207, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 2,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-207ENST00000591620 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
TREM1-207ENST00000591620 DIEXFQ68CQ4 756 aaKnown RBP14.07□□□□□ -0.16
TREM1-207ENST00000591620 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
TREM1-207ENST00000591620 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
TREM1-207ENST00000591620 DOT1LQ8TEK3 1739 aa14.05□□□□□ -0.16
TREM1-207ENST00000591620 DDB1Q16531 1140 aa14.04□□□□□ -0.16
TREM1-207ENST00000591620 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
TREM1-207ENST00000591620 ITGB4P16144 1822 aa14.03□□□□□ -0.16
TREM1-207ENST00000591620 KRT27Q7Z3Y8 459 aa14.03□□□□□ -0.16
TREM1-207ENST00000591620 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
TREM1-207ENST00000591620 CDCA7Q9BWT1 371 aaPredicted RBP14.03□□□□□ -0.16
TREM1-207ENST00000591620 U2AF1L5P0DN76 240 aaPredicted RBP14.02□□□□□ -0.16
TREM1-207ENST00000591620 U2AF1Q01081 240 aaKnown RBP eCLIP14.02□□□□□ -0.16
TREM1-207ENST00000591620 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.16
TREM1-207ENST00000591620 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.16
TREM1-207ENST00000591620 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
TREM1-207ENST00000591620 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
TREM1-207ENST00000591620 EXOC5O00471 708 aa14.01□□□□□ -0.17
TREM1-207ENST00000591620 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
TREM1-207ENST00000591620 NHSQ6T4R5 1651 aa14□□□□□ -0.17
TREM1-207ENST00000591620 PDE3BQ13370 1112 aa14□□□□□ -0.17
TREM1-207ENST00000591620 NUDCQ9Y266 331 aa14□□□□□ -0.17
TREM1-207ENST00000591620 CYP27B1O15528 508 aa14□□□□□ -0.17
TREM1-207ENST00000591620 PRKAR2BP31323 418 aa14□□□□□ -0.17
TREM1-207ENST00000591620 MIER1Q8N108 512 aa14□□□□□ -0.17
TREM1-207ENST00000591620 DDX54Q8TDD1 881 aaKnown RBP14□□□□□ -0.17
TREM1-207ENST00000591620 PHACTR3Q96KR7 559 aa13.99□□□□□ -0.17
TREM1-207ENST00000591620 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
TREM1-207ENST00000591620 BTAF1O14981 1849 aa13.98□□□□□ -0.17
TREM1-207ENST00000591620 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
TREM1-207ENST00000591620 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
TREM1-207ENST00000591620 MTHFSDQ2M296 383 aaKnown RBP13.97□□□□□ -0.17
TREM1-207ENST00000591620 FCHSD2O94868 740 aa13.96□□□□□ -0.17
TREM1-207ENST00000591620 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
TREM1-207ENST00000591620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
TREM1-207ENST00000591620 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
TREM1-207ENST00000591620 PHKG2P15735 406 aa13.95□□□□□ -0.18
TREM1-207ENST00000591620 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
TREM1-207ENST00000591620 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
TREM1-207ENST00000591620 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
TREM1-207ENST00000591620 WDR43Q15061 677 aaKnown RBP eCLIP13.95□□□□□ -0.18
TREM1-207ENST00000591620 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
TREM1-207ENST00000591620 BCL9O00512 1426 aa13.94□□□□□ -0.18
TREM1-207ENST00000591620 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
TREM1-207ENST00000591620 KCNQ2O43526 872 aa13.93□□□□□ -0.18
TREM1-207ENST00000591620 AMOTQ4VCS5 1084 aa13.93□□□□□ -0.18
TREM1-207ENST00000591620 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
TREM1-207ENST00000591620 FAM196AQ6ZSG2 479 aa13.93□□□□□ -0.18
TREM1-207ENST00000591620 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
TREM1-207ENST00000591620 TRIM37O94972 964 aa13.92□□□□□ -0.18
TREM1-207ENST00000591620 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
TREM1-207ENST00000591620 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
TREM1-207ENST00000591620 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
TREM1-207ENST00000591620 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
TREM1-207ENST00000591620 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
TREM1-207ENST00000591620 UPF1Q92900 1129 aaKnown RBP eCLIP13.9□□□□□ -0.18
TREM1-207ENST00000591620 LY75O60449 1722 aa13.9□□□□□ -0.18
TREM1-207ENST00000591620 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
TREM1-207ENST00000591620 MAP3K5Q99683 1374 aa13.9□□□□□ -0.19
TREM1-207ENST00000591620 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
TREM1-207ENST00000591620 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
TREM1-207ENST00000591620 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
TREM1-207ENST00000591620 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
TREM1-207ENST00000591620 RRP7AQ9Y3A4 280 aaKnown RBP13.89□□□□□ -0.19
TREM1-207ENST00000591620 MRC1P22897 1456 aa13.89□□□□□ -0.19
TREM1-207ENST00000591620 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
TREM1-207ENST00000591620 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
TREM1-207ENST00000591620 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
TREM1-207ENST00000591620 RREB1Q92766 1687 aa13.88□□□□□ -0.19
TREM1-207ENST00000591620 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
TREM1-207ENST00000591620 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
TREM1-207ENST00000591620 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
TREM1-207ENST00000591620 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
TREM1-207ENST00000591620 IL17REQ8NFR9 667 aa13.87□□□□□ -0.19
TREM1-207ENST00000591620 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
TREM1-207ENST00000591620 GNAT3A8MTJ3 354 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 NUP188Q5SRE5 1749 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 APAF1O14727 1248 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
TREM1-207ENST00000591620 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
TREM1-207ENST00000591620 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 BCL11BQ9C0K0 894 aaPredicted RBP13.86□□□□□ -0.19
TREM1-207ENST00000591620 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
TREM1-207ENST00000591620 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
TREM1-207ENST00000591620 KDM3BQ7LBC6 1761 aa13.85□□□□□ -0.19
TREM1-207ENST00000591620 MCM10Q7L590 875 aa13.85□□□□□ -0.19
TREM1-207ENST00000591620 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
TREM1-207ENST00000591620 THUMPD2Q9BTF0 503 aaKnown RBP13.85□□□□□ -0.19
TREM1-207ENST00000591620 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
TREM1-207ENST00000591620 PIGBQ92521 554 aa13.85□□□□□ -0.19
TREM1-207ENST00000591620 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
TREM1-207ENST00000591620 SOCS7O14512 581 aa13.84□□□□□ -0.19
TREM1-207ENST00000591620 NEFMP07197 916 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms