RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 DEPDC4Q8N2C3 294 aa8.31□□□□□ -1.08
SAFB-208ENST00000590485 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
SAFB-208ENST00000590485 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
SAFB-208ENST00000590485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
SAFB-208ENST00000590485 GRM5P41594 1212 aa8.3□□□□□ -1.08
SAFB-208ENST00000590485 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
SAFB-208ENST00000590485 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
SAFB-208ENST00000590485 ARXQ96QS3 562 aa8.3□□□□□ -1.08
SAFB-208ENST00000590485 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
SAFB-208ENST00000590485 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
SAFB-208ENST00000590485 MYCP01106 439 aaPredicted RBP8.29□□□□□ -1.08
SAFB-208ENST00000590485 TRIM50Q86XT4 487 aa8.29□□□□□ -1.08
SAFB-208ENST00000590485 VRTNQ9H8Y1 702 aa8.29□□□□□ -1.08
SAFB-208ENST00000590485 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
SAFB-208ENST00000590485 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
SAFB-208ENST00000590485 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
SAFB-208ENST00000590485 NNTQ13423 1086 aa8.28□□□□□ -1.08
SAFB-208ENST00000590485 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
SAFB-208ENST00000590485 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
SAFB-208ENST00000590485 NR3C2P08235 984 aa8.27□□□□□ -1.09
SAFB-208ENST00000590485 USP4Q13107 963 aa8.27□□□□□ -1.09
SAFB-208ENST00000590485 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
SAFB-208ENST00000590485 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
SAFB-208ENST00000590485 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
SAFB-208ENST00000590485 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
SAFB-208ENST00000590485 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
SAFB-208ENST00000590485 EMILIN1Q9Y6C2 1016 aa8.27□□□□□ -1.09
SAFB-208ENST00000590485 J3QL48 77 aa8.26□□□□□ -1.09
SAFB-208ENST00000590485 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
SAFB-208ENST00000590485 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
SAFB-208ENST00000590485 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
SAFB-208ENST00000590485 TMPRSS4Q9NRS4 437 aa8.26□□□□□ -1.09
SAFB-208ENST00000590485 SMPD1P17405 629 aa8.25□□□□□ -1.09
SAFB-208ENST00000590485 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
SAFB-208ENST00000590485 CC2D2BQ6DHV5 1058 aa8.25□□□□□ -1.09
SAFB-208ENST00000590485 ZNF784Q8NCA9 323 aaPredicted RBP8.25□□□□□ -1.09
SAFB-208ENST00000590485 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
SAFB-208ENST00000590485 RASA1P20936 1047 aa8.24□□□□□ -1.09
SAFB-208ENST00000590485 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
SAFB-208ENST00000590485 GTF2IP78347 998 aa8.24□□□□□ -1.09
SAFB-208ENST00000590485 PSME1Q06323 249 aa8.24□□□□□ -1.09
SAFB-208ENST00000590485 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
SAFB-208ENST00000590485 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L21D6R901 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 ATG7O95352 703 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 SCTRP47872 440 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
SAFB-208ENST00000590485 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
SAFB-208ENST00000590485 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
SAFB-208ENST00000590485 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
SAFB-208ENST00000590485 GMPRP36959 345 aa8.22□□□□□ -1.09
SAFB-208ENST00000590485 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
SAFB-208ENST00000590485 CYP2U1Q7Z449 544 aa8.22□□□□□ -1.09
SAFB-208ENST00000590485 ZSCAN1Q8NBB4 408 aa8.22□□□□□ -1.09
SAFB-208ENST00000590485 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
SAFB-208ENST00000590485 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
SAFB-208ENST00000590485 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
SAFB-208ENST00000590485 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
SAFB-208ENST00000590485 NACADO15069 1562 aa8.2□□□□□ -1.1
SAFB-208ENST00000590485 CLDN10P78369 228 aa8.2□□□□□ -1.1
SAFB-208ENST00000590485 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
SAFB-208ENST00000590485 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
SAFB-208ENST00000590485 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
SAFB-208ENST00000590485 LILRA1O75019 489 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 TIMP2P16035 220 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 PDE4CQ08493 712 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 PTK7Q13308 1070 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
SAFB-208ENST00000590485 HPS1Q92902 700 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
SAFB-208ENST00000590485 ANKMY2Q8IV38 441 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 SIX5Q8N196 739 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 TPCN2Q8NHX9 752 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 KIFC2Q96AC6 838 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
SAFB-208ENST00000590485 ADH1AP07327 375 aa8.17□□□□□ -1.1
SAFB-208ENST00000590485 CCDC102BQ68D86 513 aa8.17□□□□□ -1.1
SAFB-208ENST00000590485 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
SAFB-208ENST00000590485 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
SAFB-208ENST00000590485 USTQ9Y2C2 406 aa8.17□□□□□ -1.1
SAFB-208ENST00000590485 DPYDQ12882 1025 aa8.16□□□□□ -1.1
SAFB-208ENST00000590485 CBLBQ13191 982 aa8.16□□□□□ -1.1
SAFB-208ENST00000590485 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
SAFB-208ENST00000590485 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
SAFB-208ENST00000590485 KIAA1024Q9UPX6 916 aa8.16□□□□□ -1.1
SAFB-208ENST00000590485 CAPN5O15484 640 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms