RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
CHMP1B-202ENST00000588284 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 FKBP8Q14318 412 aa13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 ERBB3P21860 1342 aa13.63□□□□□ -0.23
CHMP1B-202ENST00000588284 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
CHMP1B-202ENST00000588284 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.62□□□□□ -0.23
CHMP1B-202ENST00000588284 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
CHMP1B-202ENST00000588284 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
CHMP1B-202ENST00000588284 ROBO1Q9Y6N7 1651 aa13.62□□□□□ -0.23
CHMP1B-202ENST00000588284 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
CHMP1B-202ENST00000588284 CHRNA2Q15822 529 aa13.61□□□□□ -0.23
CHMP1B-202ENST00000588284 EVA1CP58658 441 aa13.6□□□□□ -0.23
CHMP1B-202ENST00000588284 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
CHMP1B-202ENST00000588284 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
CHMP1B-202ENST00000588284 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
CHMP1B-202ENST00000588284 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
CHMP1B-202ENST00000588284 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
CHMP1B-202ENST00000588284 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
CHMP1B-202ENST00000588284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHMP1B-202ENST00000588284 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 COL18A1P39060 1754 aa13.58□□□□□ -0.24
CHMP1B-202ENST00000588284 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
CHMP1B-202ENST00000588284 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
CHMP1B-202ENST00000588284 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
CHMP1B-202ENST00000588284 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
CHMP1B-202ENST00000588284 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
CHMP1B-202ENST00000588284 CHL1O00533 1208 aa13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 TOM1L2Q6ZVM7 507 aa13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 MAP3K5Q99683 1374 aa13.56□□□□□ -0.24
CHMP1B-202ENST00000588284 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
CHMP1B-202ENST00000588284 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
CHMP1B-202ENST00000588284 MCM10Q7L590 875 aa13.55□□□□□ -0.24
CHMP1B-202ENST00000588284 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-202ENST00000588284 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-202ENST00000588284 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
CHMP1B-202ENST00000588284 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
CHMP1B-202ENST00000588284 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
CHMP1B-202ENST00000588284 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
CHMP1B-202ENST00000588284 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
CHMP1B-202ENST00000588284 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 MS4A1P11836 297 aa13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 BTG4Q9NY30 223 aa13.52□□□□□ -0.25
CHMP1B-202ENST00000588284 CRB1P82279 1406 aa13.51□□□□□ -0.25
CHMP1B-202ENST00000588284 HSPA1LP34931 641 aa13.51□□□□□ -0.25
CHMP1B-202ENST00000588284 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
CHMP1B-202ENST00000588284 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
CHMP1B-202ENST00000588284 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
CHMP1B-202ENST00000588284 LMO7Q8WWI1 1683 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 COL5A2P05997 1499 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 JCADQ9P266 1359 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 VAMP4O75379 141 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 BCAR3O75815 825 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 IL2RBP14784 551 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 TEFQ10587 303 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
CHMP1B-202ENST00000588284 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 IPO8O15397 1037 aaKnown RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 ABCA3Q99758 1704 aa13.49□□□□□ -0.25
CHMP1B-202ENST00000588284 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 LGR6Q9HBX8 967 aa13.48□□□□□ -0.25
CHMP1B-202ENST00000588284 SMC4Q9NTJ3 1288 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms