RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RGL4Q8IZJ4 473 aa9.78□□□□□ -0.84
TPM4-203ENST00000586193 GAS2L2Q8NHY3 880 aa9.78□□□□□ -0.84
TPM4-203ENST00000586193 ERBB3P21860 1342 aa9.78□□□□□ -0.84
TPM4-203ENST00000586193 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
TPM4-203ENST00000586193 SMARCA5O60264 1052 aaPredicted RBP9.77□□□□□ -0.85
TPM4-203ENST00000586193 WEE1P30291 646 aa9.77□□□□□ -0.85
TPM4-203ENST00000586193 NAA30Q147X3 362 aaPredicted RBP9.77□□□□□ -0.85
TPM4-203ENST00000586193 TSEN2Q8NCE0 465 aaKnown RBP9.77□□□□□ -0.85
TPM4-203ENST00000586193 UBXN4Q92575 508 aa9.77□□□□□ -0.85
TPM4-203ENST00000586193 PRDM9Q9NQV7 894 aa9.77□□□□□ -0.85
TPM4-203ENST00000586193 MMP16P51512 607 aa9.76□□□□□ -0.85
TPM4-203ENST00000586193 SF3A1Q15459 793 aaKnown RBP9.76□□□□□ -0.85
TPM4-203ENST00000586193 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
TPM4-203ENST00000586193 PTCD1O75127 700 aaKnown RBP9.75□□□□□ -0.85
TPM4-203ENST00000586193 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
TPM4-203ENST00000586193 PBX2P40425 430 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 USP4Q13107 963 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 RNF20Q5VTR2 975 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 SPSB2Q99619 263 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 UNC93B1Q9H1C4 597 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
TPM4-203ENST00000586193 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
TPM4-203ENST00000586193 MRPL58Q14197 206 aaKnown RBP9.74□□□□□ -0.85
TPM4-203ENST00000586193 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
TPM4-203ENST00000586193 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
TPM4-203ENST00000586193 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
TPM4-203ENST00000586193 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
TPM4-203ENST00000586193 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
TPM4-203ENST00000586193 PCDHB11Q9Y5F2 797 aa9.73□□□□□ -0.85
TPM4-203ENST00000586193 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
TPM4-203ENST00000586193 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
TPM4-203ENST00000586193 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
TPM4-203ENST00000586193 HELQQ8TDG4 1101 aa9.72□□□□□ -0.85
TPM4-203ENST00000586193 M0R2N6 131 aa9.71□□□□□ -0.86
TPM4-203ENST00000586193 RBCK1Q9BYM8 510 aa9.71□□□□□ -0.86
TPM4-203ENST00000586193 FAM13AO94988 1023 aa9.7□□□□□ -0.86
TPM4-203ENST00000586193 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
TPM4-203ENST00000586193 AGERQ15109 404 aa9.7□□□□□ -0.86
TPM4-203ENST00000586193 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
TPM4-203ENST00000586193 BCAMP50895 628 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 PIK3R5Q8WYR1 880 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 COL26A1Q96A83 441 aa9.69□□□□□ -0.86
TPM4-203ENST00000586193 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
TPM4-203ENST00000586193 SOWAHBA6NEL2 793 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 TK2O00142 265 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
TPM4-203ENST00000586193 NPR3P17342 541 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 MPSTP25325 297 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 BAP1Q92560 729 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 FAM161BQ96MY7 647 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
TPM4-203ENST00000586193 TREHO43280 583 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 NDUFB5O43674 189 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
TPM4-203ENST00000586193 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 BPHLQ86WA6 291 aaPredicted RBP9.67□□□□□ -0.86
TPM4-203ENST00000586193 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
TPM4-203ENST00000586193 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
TPM4-203ENST00000586193 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 ESPNB1AK53 854 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 FOXO3O43524 673 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 IGFBP4P22692 258 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 COPS2P61201 443 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 FMR1Q06787 632 aaKnown RBP eCLIP9.66□□□□□ -0.86
TPM4-203ENST00000586193 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
TPM4-203ENST00000586193 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 MYCP01106 439 aaPredicted RBP9.65□□□□□ -0.86
TPM4-203ENST00000586193 LDHBP07195 334 aaKnown RBP9.65□□□□□ -0.86
TPM4-203ENST00000586193 MAPK8P45983 427 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 RAB15P59190 212 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.86
TPM4-203ENST00000586193 RNF19AQ9NV58 838 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 PARP2Q9UGN5 583 aa9.65□□□□□ -0.86
TPM4-203ENST00000586193 PLCB3Q01970 1234 aa9.64□□□□□ -0.87
TPM4-203ENST00000586193 NT5DC4Q86YG4 428 aa9.64□□□□□ -0.87
TPM4-203ENST00000586193 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
TPM4-203ENST00000586193 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
TPM4-203ENST00000586193 TLL1O43897 1013 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 AAMPQ13685 434 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 DSC3Q14574 896 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 DPH6Q7L8W6 267 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 METTL16Q86W50 562 aaKnown RBP9.63□□□□□ -0.87
TPM4-203ENST00000586193 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 VTI1AQ96AJ9 217 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 SAP130Q9H0E3 1048 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 CCDC87Q9NVE4 849 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 PCDH10Q9P2E7 1040 aa9.63□□□□□ -0.87
TPM4-203ENST00000586193 TMEM229AB2RXF0 380 aa9.62□□□□□ -0.87
TPM4-203ENST00000586193 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
TPM4-203ENST00000586193 ZNF511Q8NB15 262 aa9.62□□□□□ -0.87
TPM4-203ENST00000586193 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms