RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
CTC1-212ENST00000584439 USP19O94966 1318 aa9.3□□□□□ -0.92
CTC1-212ENST00000584439 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
CTC1-212ENST00000584439 ADGRB1O14514 1584 aa9.29□□□□□ -0.92
CTC1-212ENST00000584439 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
CTC1-212ENST00000584439 POLD1P28340 1107 aa9.29□□□□□ -0.92
CTC1-212ENST00000584439 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
CTC1-212ENST00000584439 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
CTC1-212ENST00000584439 N4BP2Q86UW6 1770 aaPredicted RBP9.28□□□□□ -0.92
CTC1-212ENST00000584439 GCP02774 474 aa9.28□□□□□ -0.92
CTC1-212ENST00000584439 TOM1L2Q6ZVM7 507 aa9.28□□□□□ -0.92
CTC1-212ENST00000584439 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
CTC1-212ENST00000584439 TAF1LQ8IZX4 1826 aa9.28□□□□□ -0.92
CTC1-212ENST00000584439 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
CTC1-212ENST00000584439 HS6ST3Q8IZP7 471 aa9.27□□□□□ -0.93
CTC1-212ENST00000584439 ABTB2Q8N961 1025 aa9.27□□□□□ -0.93
CTC1-212ENST00000584439 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
CTC1-212ENST00000584439 ACEP12821 1306 aa9.27□□□□□ -0.93
CTC1-212ENST00000584439 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
CTC1-212ENST00000584439 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
CTC1-212ENST00000584439 SLC16A10Q8TF71 515 aa9.26□□□□□ -0.93
CTC1-212ENST00000584439 TRPM1Q7Z4N2 1603 aa9.26□□□□□ -0.93
CTC1-212ENST00000584439 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
CTC1-212ENST00000584439 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 KIAA1551Q9HCM1 1747 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 USP6P35125 1406 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 NMRK2Q9NPI5 230 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 SLIT3O75094 1523 aa9.25□□□□□ -0.93
CTC1-212ENST00000584439 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
CTC1-212ENST00000584439 TOMM70O94826 608 aa9.24□□□□□ -0.93
CTC1-212ENST00000584439 PKD1L3Q7Z443 1732 aa9.24□□□□□ -0.93
CTC1-212ENST00000584439 WDR17Q8IZU2 1322 aa9.24□□□□□ -0.93
CTC1-212ENST00000584439 CICQ96RK0 1608 aaPredicted RBP9.23□□□□□ -0.93
CTC1-212ENST00000584439 SBF1O95248 1867 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 BRCA1P38398 1863 aaKnown RBP9.23□□□□□ -0.93
CTC1-212ENST00000584439 TNS2Q63HR2 1409 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 ABCC6O95255 1503 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 EXOC5O00471 708 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 TFCP2L1Q9NZI6 479 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 PCDH10Q9P2E7 1040 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
CTC1-212ENST00000584439 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
CTC1-212ENST00000584439 EIF3AQ14152 1382 aaKnown RBP9.23□□□□□ -0.93
CTC1-212ENST00000584439 C5P01031 1676 aa9.23□□□□□ -0.93
CTC1-212ENST00000584439 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
CTC1-212ENST00000584439 HSPA1AP0DMV8 641 aaKnown RBP9.22□□□□□ -0.93
CTC1-212ENST00000584439 HSPA1BP0DMV9 641 aaKnown RBP9.22□□□□□ -0.93
CTC1-212ENST00000584439 COL23A1Q86Y22 540 aaPredicted RBP9.22□□□□□ -0.93
CTC1-212ENST00000584439 LTN1O94822 1766 aa9.22□□□□□ -0.93
CTC1-212ENST00000584439 NKX1-1Q15270 411 aaPredicted RBP9.21□□□□□ -0.94
CTC1-212ENST00000584439 NLRP13Q86W25 1043 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 KIAA1210Q9ULL0 1709 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 RGPD2P0DJD1 1756 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 KIF13BQ9NQT8 1826 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.94
CTC1-212ENST00000584439 CARD10Q9BWT7 1032 aa9.2□□□□□ -0.94
CTC1-212ENST00000584439 CDK19Q9BWU1 502 aa9.2□□□□□ -0.94
CTC1-212ENST00000584439 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
CTC1-212ENST00000584439 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
CTC1-212ENST00000584439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTC1-212ENST00000584439 CDCA7Q9BWT1 371 aaPredicted RBP9.19□□□□□ -0.94
CTC1-212ENST00000584439 CD2APQ9Y5K6 639 aa9.19□□□□□ -0.94
CTC1-212ENST00000584439 PPIP5K1Q6PFW1 1433 aa9.19□□□□□ -0.94
CTC1-212ENST00000584439 PLEKHG3A1L390 1219 aa9.18□□□□□ -0.94
CTC1-212ENST00000584439 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
CTC1-212ENST00000584439 CPSF1Q10570 1443 aaKnown RBP9.18□□□□□ -0.94
CTC1-212ENST00000584439 FAM161AQ3B820 660 aa9.18□□□□□ -0.94
CTC1-212ENST00000584439 SMIM5Q71RC9 77 aa9.18□□□□□ -0.94
CTC1-212ENST00000584439 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
CTC1-212ENST00000584439 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
CTC1-212ENST00000584439 TNRC6CQ9HCJ0 1690 aaKnown RBP9.17□□□□□ -0.94
CTC1-212ENST00000584439 NLRP6P59044 892 aa9.17□□□□□ -0.94
CTC1-212ENST00000584439 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
CTC1-212ENST00000584439 SOX12O15370 315 aa9.16□□□□□ -0.94
CTC1-212ENST00000584439 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
CTC1-212ENST00000584439 SLC27A3Q5K4L6 730 aa9.16□□□□□ -0.94
CTC1-212ENST00000584439 NFAT5O94916 1531 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 KCPQ6ZWJ8 1503 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 NSD2O96028 1365 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 CCDC61Q9Y6R9 512 aa9.15□□□□□ -0.94
CTC1-212ENST00000584439 ITGB4P16144 1822 aa9.15□□□□□ -0.95
CTC1-212ENST00000584439 ERBB3P21860 1342 aa9.14□□□□□ -0.95
CTC1-212ENST00000584439 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
CTC1-212ENST00000584439 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
CTC1-212ENST00000584439 CCDC7Q96M83 1385 aa9.13□□□□□ -0.95
CTC1-212ENST00000584439 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
CTC1-212ENST00000584439 FSTL1Q12841 308 aa9.12□□□□□ -0.95
CTC1-212ENST00000584439 MPHOSPH9Q99550 1183 aa9.12□□□□□ -0.95
CTC1-212ENST00000584439 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
CTC1-212ENST00000584439 PXDNLA1KZ92 1463 aa9.11□□□□□ -0.95
CTC1-212ENST00000584439 C16orf71Q8IYS4 520 aaPredicted RBP9.11□□□□□ -0.95
CTC1-212ENST00000584439 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
CTC1-212ENST00000584439 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
CTC1-212ENST00000584439 RRAGCQ9HB90 399 aa9.11□□□□□ -0.95
CTC1-212ENST00000584439 FOXN1O15353 648 aa9.1□□□□□ -0.95
CTC1-212ENST00000584439 IL2RBP14784 551 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms