RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 PCDHGA4Q9Y5G9 962 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 DISP2A7MBM2 1401 aa7.84□□□□□ -1.15
VAPA-207ENST00000583879 EIF3AQ14152 1382 aaKnown RBP7.84□□□□□ -1.16
VAPA-207ENST00000583879 NWD2Q9ULI1 1742 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 LRP5O75197 1615 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 ZC3H6P61129 1189 aaKnown RBP7.83□□□□□ -1.16
VAPA-207ENST00000583879 PDE3BQ13370 1112 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 BARGINQ6ZT62 677 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 TMC2Q8TDI7 906 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
VAPA-207ENST00000583879 USP35Q9P2H5 1018 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 AXIN2Q9Y2T1 843 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 KIAA0232Q92628 1395 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 DLC1Q96QB1 1528 aa7.83□□□□□ -1.16
VAPA-207ENST00000583879 NBPF8Q3BBV2 869 aa7.82□□□□□ -1.16
VAPA-207ENST00000583879 NBPF14Q5TI25 921 aa7.82□□□□□ -1.16
VAPA-207ENST00000583879 NUTM2GQ5VZR2 741 aa7.82□□□□□ -1.16
VAPA-207ENST00000583879 IFT172Q9UG01 1749 aa7.82□□□□□ -1.16
VAPA-207ENST00000583879 PLCH1Q4KWH8 1693 aa7.82□□□□□ -1.16
VAPA-207ENST00000583879 RGPD8O14715 1765 aaPredicted RBP7.82□□□□□ -1.16
VAPA-207ENST00000583879 CDK19Q9BWU1 502 aa7.81□□□□□ -1.16
VAPA-207ENST00000583879 HCSTQ9UBK5 93 aa7.81□□□□□ -1.16
VAPA-207ENST00000583879 PARD3Q8TEW0 1356 aa7.81□□□□□ -1.16
VAPA-207ENST00000583879 ADGRB1O14514 1584 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 COL14A1Q05707 1796 aaKnown RBP7.8□□□□□ -1.16
VAPA-207ENST00000583879 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 ECM2O94769 699 aaPredicted RBP7.8□□□□□ -1.16
VAPA-207ENST00000583879 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
VAPA-207ENST00000583879 POTEEQ6S8J3 1075 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 TCP11L2Q8N4U5 519 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 ABTB2Q8N961 1025 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
VAPA-207ENST00000583879 THRAP3Q9Y2W1 955 aaKnown RBP7.8□□□□□ -1.16
VAPA-207ENST00000583879 ACEP12821 1306 aa7.79□□□□□ -1.16
VAPA-207ENST00000583879 TULP4Q9NRJ4 1543 aa7.79□□□□□ -1.16
VAPA-207ENST00000583879 NRAPQ86VF7 1730 aa7.79□□□□□ -1.16
VAPA-207ENST00000583879 YY1P25490 414 aa7.79□□□□□ -1.16
VAPA-207ENST00000583879 ADGRB2O60241 1585 aa7.79□□□□□ -1.16
VAPA-207ENST00000583879 TRPM3Q9HCF6 1732 aaPredicted RBP7.78□□□□□ -1.16
VAPA-207ENST00000583879 C11orf95C9JLR9 678 aaPredicted RBP7.78□□□□□ -1.16
VAPA-207ENST00000583879 ARHGAP33O14559 1287 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 KCNQ2O43526 872 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 GCP02774 474 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 NLRP13Q86W25 1043 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 ALS2Q96Q42 1657 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 ABCA3Q99758 1704 aa7.78□□□□□ -1.16
VAPA-207ENST00000583879 THSD7AQ9UPZ6 1657 aa7.77□□□□□ -1.17
VAPA-207ENST00000583879 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
VAPA-207ENST00000583879 RAB3GAP2Q9H2M9 1393 aa7.77□□□□□ -1.17
VAPA-207ENST00000583879 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
VAPA-207ENST00000583879 PPP1R1BQ9UD71 204 aaPredicted RBP7.77□□□□□ -1.17
VAPA-207ENST00000583879 SSH2Q76I76 1423 aa7.77□□□□□ -1.17
VAPA-207ENST00000583879 CPDO75976 1380 aa7.76□□□□□ -1.17
VAPA-207ENST00000583879 RGPD1P0DJD0 1748 aa7.76□□□□□ -1.17
VAPA-207ENST00000583879 PLSCR1O15162 318 aa7.76□□□□□ -1.17
VAPA-207ENST00000583879 ATP7BP35670 1465 aa7.75□□□□□ -1.17
VAPA-207ENST00000583879 CAMTA1Q9Y6Y1 1673 aa7.75□□□□□ -1.17
VAPA-207ENST00000583879 USP19O94966 1318 aa7.75□□□□□ -1.17
VAPA-207ENST00000583879 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
VAPA-207ENST00000583879 DDB1Q16531 1140 aa7.74□□□□□ -1.17
VAPA-207ENST00000583879 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
VAPA-207ENST00000583879 TNS1Q9HBL0 1735 aaKnown RBP7.73□□□□□ -1.17
VAPA-207ENST00000583879 AMER1Q5JTC6 1135 aaPredicted RBP7.73□□□□□ -1.17
VAPA-207ENST00000583879 TOM1L2Q6ZVM7 507 aa7.73□□□□□ -1.17
VAPA-207ENST00000583879 PTF1AQ7RTS3 328 aa7.73□□□□□ -1.17
VAPA-207ENST00000583879 CABP1Q9NZU7 370 aa7.73□□□□□ -1.17
VAPA-207ENST00000583879 BRD4O60885 1362 aaPredicted RBP7.72□□□□□ -1.17
VAPA-207ENST00000583879 NINLQ9Y2I6 1382 aa7.72□□□□□ -1.17
VAPA-207ENST00000583879 CRB1P82279 1406 aa7.72□□□□□ -1.17
VAPA-207ENST00000583879 ZBTB7CA1YPR0 619 aa7.72□□□□□ -1.17
VAPA-207ENST00000583879 TK2O00142 265 aa7.72□□□□□ -1.17
VAPA-207ENST00000583879 MARCH10Q8NA82 808 aaPredicted RBP7.72□□□□□ -1.17
VAPA-207ENST00000583879 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
VAPA-207ENST00000583879 AATKQ6ZMQ8 1374 aa7.71□□□□□ -1.17
VAPA-207ENST00000583879 COL5A2P05997 1499 aaPredicted RBP7.71□□□□□ -1.18
VAPA-207ENST00000583879 RGL2O15211 777 aa7.71□□□□□ -1.18
VAPA-207ENST00000583879 PPP1R37O75864 691 aa7.71□□□□□ -1.18
VAPA-207ENST00000583879 PTCD2Q8WV60 388 aaKnown RBP7.71□□□□□ -1.18
VAPA-207ENST00000583879 CDCA7Q9BWT1 371 aaPredicted RBP7.71□□□□□ -1.18
VAPA-207ENST00000583879 PDGFDQ9GZP0 370 aaPredicted RBP7.71□□□□□ -1.18
VAPA-207ENST00000583879 ANO8Q9HCE9 1232 aaPredicted RBP7.71□□□□□ -1.18
VAPA-207ENST00000583879 OVOS2A0A0G2JMS6 1433 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 OVOS2A0A0J9YW53 1432 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 OVOS2Q6IE36 1432 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 PPIP5K1Q6PFW1 1433 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 EXOC5O00471 708 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 ZBTB7AO95365 584 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 TXNRD1Q16881 649 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 DAXXQ9UER7 740 aaPredicted RBP7.7□□□□□ -1.18
VAPA-207ENST00000583879 WDR17Q8IZU2 1322 aa7.7□□□□□ -1.18
VAPA-207ENST00000583879 CENPJQ9HC77 1338 aaPredicted RBP7.7□□□□□ -1.18
VAPA-207ENST00000583879 PSEN2P49810 448 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 SLC15A2Q16348 729 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 ARHGEF25Q86VW2 580 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
VAPA-207ENST00000583879 SYT17Q9BSW7 474 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms