RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 CAMKK2Q96RR4 588 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 USP19O94966 1318 aa11.32□□□□□ -0.6
SMCHD1-210ENST00000583800 CPDO75976 1380 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 EVA1CP58658 441 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 LARP1Q6PKG0 1096 aaKnown RBP11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 ARXQ96QS3 562 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 LRRC37A3O60309 1634 aa11.31□□□□□ -0.6
SMCHD1-210ENST00000583800 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
SMCHD1-210ENST00000583800 APBA3O96018 575 aa11.3□□□□□ -0.6
SMCHD1-210ENST00000583800 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
SMCHD1-210ENST00000583800 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
SMCHD1-210ENST00000583800 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
SMCHD1-210ENST00000583800 PARD3Q8TEW0 1356 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 PEAK1Q9H792 1746 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 COL18A1P39060 1754 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 PDE3BQ13370 1112 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 TCP11L2Q8N4U5 519 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 SLIT3O75094 1523 aa11.29□□□□□ -0.6
SMCHD1-210ENST00000583800 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 EMP3P54852 163 aa11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
SMCHD1-210ENST00000583800 TRPM1Q7Z4N2 1603 aa11.27□□□□□ -0.6
SMCHD1-210ENST00000583800 USP6P35125 1406 aa11.27□□□□□ -0.6
SMCHD1-210ENST00000583800 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
SMCHD1-210ENST00000583800 GCP02774 474 aa11.27□□□□□ -0.61
SMCHD1-210ENST00000583800 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
SMCHD1-210ENST00000583800 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
SMCHD1-210ENST00000583800 CRB1P82279 1406 aa11.26□□□□□ -0.61
SMCHD1-210ENST00000583800 THRAP3Q9Y2W1 955 aaKnown RBP11.26□□□□□ -0.61
SMCHD1-210ENST00000583800 RGL2O15211 777 aa11.25□□□□□ -0.61
SMCHD1-210ENST00000583800 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
SMCHD1-210ENST00000583800 OVOS2A0A0G2JMS6 1433 aa11.25□□□□□ -0.61
SMCHD1-210ENST00000583800 OVOS2A0A0J9YW53 1432 aa11.25□□□□□ -0.61
SMCHD1-210ENST00000583800 OVOS2Q6IE36 1432 aa11.25□□□□□ -0.61
SMCHD1-210ENST00000583800 POTEB3A0JP26 581 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 NLRP6P59044 892 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 GSE1Q14687 1217 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 POTEBQ6S5H4 581 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
SMCHD1-210ENST00000583800 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 HS3ST6Q96QI5 342 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.613e-9■■■■□ 24.2
SMCHD1-210ENST00000583800 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 CASZ1Q86V15 1759 aa11.23□□□□□ -0.61
SMCHD1-210ENST00000583800 NBR1Q14596 966 aa11.22□□□□□ -0.61
SMCHD1-210ENST00000583800 MON2Q7Z3U7 1717 aa11.22□□□□□ -0.61
SMCHD1-210ENST00000583800 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
SMCHD1-210ENST00000583800 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
SMCHD1-210ENST00000583800 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.61
SMCHD1-210ENST00000583800 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
SMCHD1-210ENST00000583800 NFAT5O94916 1531 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 SOX12O15370 315 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 DDB1Q16531 1140 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 LTN1O94822 1766 aa11.2□□□□□ -0.62
SMCHD1-210ENST00000583800 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
SMCHD1-210ENST00000583800 PSEN1P49768 467 aa11.19□□□□□ -0.62
SMCHD1-210ENST00000583800 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
SMCHD1-210ENST00000583800 ROCK2O75116 1388 aaKnown RBP11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 MYOM1P52179 1685 aa11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 SIN3AQ96ST3 1273 aa11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 PPP1R1BQ9UD71 204 aaPredicted RBP11.18□□□□□ -0.62
SMCHD1-210ENST00000583800 PLSCR1O15162 318 aa11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 KCNQ2O43526 872 aa11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 CSB-PGBD3P0DP91 1061 aa11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 MARCH10Q8NA82 808 aaPredicted RBP11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
SMCHD1-210ENST00000583800 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 ABCC6O95255 1503 aa11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 KCNH5Q8NCM2 988 aa11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 BCL9O00512 1426 aa11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
SMCHD1-210ENST00000583800 TTC21AQ8NDW8 1320 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms