RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 USP4Q13107 963 aa7.64□□□□□ -1.19
VAPA-206ENST00000583475 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
VAPA-206ENST00000583475 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
VAPA-206ENST00000583475 INSM2Q96T92 566 aaPredicted RBP7.64□□□□□ -1.19
VAPA-206ENST00000583475 SOBPA7XYQ1 873 aa7.63□□□□□ -1.19
VAPA-206ENST00000583475 ATP5J2-PTCD1G3V325 749 aa7.63□□□□□ -1.19
VAPA-206ENST00000583475 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
VAPA-206ENST00000583475 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
VAPA-206ENST00000583475 GLMNQ92990 594 aa7.63□□□□□ -1.19
VAPA-206ENST00000583475 UCN2Q96RP3 112 aa7.63□□□□□ -1.19
VAPA-206ENST00000583475 A0A1W2PRU2 124 aa7.62□□□□□ -1.19
VAPA-206ENST00000583475 TTLL8A6PVC2 850 aa7.62□□□□□ -1.19
VAPA-206ENST00000583475 MYCP01106 439 aaPredicted RBP7.62□□□□□ -1.19
VAPA-206ENST00000583475 SKIP12755 728 aa7.62□□□□□ -1.19
VAPA-206ENST00000583475 OXLD1Q5BKU9 147 aa7.62□□□□□ -1.19
VAPA-206ENST00000583475 ESF1Q9H501 851 aaKnown RBP7.62□□□□□ -1.19
VAPA-206ENST00000583475 ZNF777Q9ULD5 760 aaPredicted RBP7.62□□□□□ -1.19
VAPA-206ENST00000583475 FIGNL2A6NMB9 653 aa7.61□□□□□ -1.19
VAPA-206ENST00000583475 TBC1D9Q6ZT07 1266 aa7.61□□□□□ -1.19
VAPA-206ENST00000583475 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
VAPA-206ENST00000583475 DNMT3LQ9UJW3 386 aa7.61□□□□□ -1.19
VAPA-206ENST00000583475 MAN1A2O60476 641 aa7.6□□□□□ -1.19
VAPA-206ENST00000583475 SIRT1Q96EB6 747 aa7.6□□□□□ -1.19
VAPA-206ENST00000583475 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
VAPA-206ENST00000583475 LZTS3O60299 673 aaPredicted RBP7.59□□□□□ -1.19
VAPA-206ENST00000583475 GNRH1P01148 92 aa7.59□□□□□ -1.19
VAPA-206ENST00000583475 FOXD4L5Q5VV16 416 aaPredicted RBP7.59□□□□□ -1.19
VAPA-206ENST00000583475 POLMQ9NP87 494 aaPredicted RBP7.59□□□□□ -1.19
VAPA-206ENST00000583475 MEN1O00255 615 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 RNF144AP50876 292 aaPredicted RBP7.58□□□□□ -1.2
VAPA-206ENST00000583475 CLN3Q13286 438 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 ARHGEF10LQ9HCE6 1279 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
VAPA-206ENST00000583475 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 ATP9BO43861 1147 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 STAU1O95793 577 aaKnown RBP7.57□□□□□ -1.2
VAPA-206ENST00000583475 IL2RAP01589 272 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 NCOA4Q13772 614 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.57□□□□□ -1.2
VAPA-206ENST00000583475 EML3Q32P44 896 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 XAGE2Q96GT9 111 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 RAB6BQ9NRW1 208 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 TFIP11Q9UBB9 837 aaKnown RBP7.57□□□□□ -1.2
VAPA-206ENST00000583475 HRH3Q9Y5N1 445 aa7.57□□□□□ -1.2
VAPA-206ENST00000583475 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
VAPA-206ENST00000583475 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
VAPA-206ENST00000583475 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
VAPA-206ENST00000583475 GRIP2Q9C0E4 1043 aa7.56□□□□□ -1.2
VAPA-206ENST00000583475 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
VAPA-206ENST00000583475 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
VAPA-206ENST00000583475 TERTO14746 1132 aaKnown RBP7.55□□□□□ -1.2
VAPA-206ENST00000583475 GPC1P35052 558 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 CENPCQ03188 943 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 USP17L2Q6R6M4 530 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 USP17L1Q7RTZ2 530 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
VAPA-206ENST00000583475 SCNN1DP51172 638 aa7.54□□□□□ -1.2
VAPA-206ENST00000583475 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
VAPA-206ENST00000583475 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
VAPA-206ENST00000583475 GTF2IP78347 998 aa7.53□□□□□ -1.2
VAPA-206ENST00000583475 PTSQ03393 145 aa7.53□□□□□ -1.2
VAPA-206ENST00000583475 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
VAPA-206ENST00000583475 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
VAPA-206ENST00000583475 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
VAPA-206ENST00000583475 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
VAPA-206ENST00000583475 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
VAPA-206ENST00000583475 TMEM229AB2RXF0 380 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 INHAP05111 366 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 GDF10P55107 478 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 C14orf37Q86TY3 774 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 NPAS3Q8IXF0 933 aa7.52□□□□□ -1.21
VAPA-206ENST00000583475 FHDC1Q9C0D6 1143 aaPredicted RBP7.52□□□□□ -1.21
VAPA-206ENST00000583475 MKRN1Q9UHC7 482 aaKnown RBP7.52□□□□□ -1.21
VAPA-206ENST00000583475 SENP3-EIF4A1A0A087X0R7 540 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
VAPA-206ENST00000583475 PPFIA3O75145 1194 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 VEGFBP49765 207 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 CLDN10P78369 228 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 POU4F2Q12837 409 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 SLC27A3Q5K4L6 730 aa7.51□□□□□ -1.21
VAPA-206ENST00000583475 SPATA31C2B4DYI2 1134 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 H3BM21 787 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 RHOQP17081 205 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
VAPA-206ENST00000583475 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
VAPA-206ENST00000583475 WFS1O76024 890 aa7.49□□□□□ -1.21
VAPA-206ENST00000583475 CFAP70Q5T0N1 1121 aa7.49□□□□□ -1.21
VAPA-206ENST00000583475 KANK4Q5T7N3 995 aaPredicted RBP7.49□□□□□ -1.21
VAPA-206ENST00000583475 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms