RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 PRM3Q9NNZ6 103 aa8.23□□□□□ -1.09
DHX40-209ENST00000583439 CDC14CA4D256 554 aa8.22□□□□□ -1.09
DHX40-209ENST00000583439 MEN1O00255 615 aa8.22□□□□□ -1.09
DHX40-209ENST00000583439 CCDC155Q8N6L0 562 aa8.22□□□□□ -1.09
DHX40-209ENST00000583439 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
DHX40-209ENST00000583439 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
DHX40-209ENST00000583439 PRKCSHP14314 528 aaPredicted RBP8.2□□□□□ -1.1
DHX40-209ENST00000583439 MCCD1P59942 119 aaPredicted RBP8.2□□□□□ -1.1
DHX40-209ENST00000583439 RNF217Q8TC41 542 aa8.2□□□□□ -1.1
DHX40-209ENST00000583439 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
DHX40-209ENST00000583439 PRICKLE2Q7Z3G6 844 aa8.19□□□□□ -1.1
DHX40-209ENST00000583439 NLRP3Q96P20 1036 aa8.19□□□□□ -1.1
DHX40-209ENST00000583439 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
DHX40-209ENST00000583439 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
DHX40-209ENST00000583439 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 RHOQP17081 205 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 ITGA6P23229 1130 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
DHX40-209ENST00000583439 CCDC125Q86Z20 511 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 VWA5B2Q8N398 1253 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
DHX40-209ENST00000583439 SV2AQ7L0J3 742 aa8.16□□□□□ -1.1
DHX40-209ENST00000583439 GPR161Q8N6U8 529 aaKnown RBP8.16□□□□□ -1.1
DHX40-209ENST00000583439 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
DHX40-209ENST00000583439 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
DHX40-209ENST00000583439 SOCS7O14512 581 aa8.15□□□□□ -1.1
DHX40-209ENST00000583439 IRS1P35568 1242 aa8.15□□□□□ -1.1
DHX40-209ENST00000583439 KANK3Q6NY19 840 aa8.15□□□□□ -1.1
DHX40-209ENST00000583439 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.1
DHX40-209ENST00000583439 MYCP01106 439 aaPredicted RBP8.14□□□□□ -1.11
DHX40-209ENST00000583439 ABL2P42684 1182 aa8.14□□□□□ -1.11
DHX40-209ENST00000583439 SCTRP47872 440 aa8.14□□□□□ -1.11
DHX40-209ENST00000583439 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
DHX40-209ENST00000583439 EIF4G2P78344 907 aaKnown RBP eCLIP8.14□□□□□ -1.11
DHX40-209ENST00000583439 KRT76Q01546 638 aa8.14□□□□□ -1.11
DHX40-209ENST00000583439 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
DHX40-209ENST00000583439 ADAM23O75077 832 aa8.13□□□□□ -1.11
DHX40-209ENST00000583439 RNF144AP50876 292 aaPredicted RBP8.13□□□□□ -1.11
DHX40-209ENST00000583439 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
DHX40-209ENST00000583439 ARHGEF10LQ9HCE6 1279 aa8.13□□□□□ -1.11
DHX40-209ENST00000583439 RAB6BQ9NRW1 208 aa8.13□□□□□ -1.11
DHX40-209ENST00000583439 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
DHX40-209ENST00000583439 GPR37L1O60883 481 aa8.12□□□□□ -1.11
DHX40-209ENST00000583439 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
DHX40-209ENST00000583439 GAS2L1Q99501 681 aaPredicted RBP8.12□□□□□ -1.11
DHX40-209ENST00000583439 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
DHX40-209ENST00000583439 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
DHX40-209ENST00000583439 VAC14Q08AM6 782 aa8.11□□□□□ -1.11
DHX40-209ENST00000583439 POU4F2Q12837 409 aa8.11□□□□□ -1.11
DHX40-209ENST00000583439 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
DHX40-209ENST00000583439 NANOS1Q8WY41 292 aaKnown RBP8.11□□□□□ -1.11
DHX40-209ENST00000583439 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
DHX40-209ENST00000583439 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
DHX40-209ENST00000583439 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
DHX40-209ENST00000583439 GPC1P35052 558 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 CLN3Q13286 438 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 RNFT1Q5M7Z0 435 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 FOXR1Q6PIV2 292 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 OSBPL3Q9H4L5 887 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 DOLKQ9UPQ8 538 aa8.09□□□□□ -1.11
DHX40-209ENST00000583439 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.08□□□□□ -1.12
DHX40-209ENST00000583439 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
DHX40-209ENST00000583439 RNF135Q8IUD6 432 aa8.08□□□□□ -1.12
DHX40-209ENST00000583439 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
DHX40-209ENST00000583439 CCDC85AQ96PX6 553 aaPredicted RBP8.08□□□□□ -1.12
DHX40-209ENST00000583439 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
DHX40-209ENST00000583439 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
DHX40-209ENST00000583439 IRF5Q13568 498 aa8.07□□□□□ -1.12
DHX40-209ENST00000583439 CNKSR1Q969H4 720 aa8.07□□□□□ -1.12
DHX40-209ENST00000583439 GNRH1P01148 92 aa8.06□□□□□ -1.12
DHX40-209ENST00000583439 USP4Q13107 963 aa8.06□□□□□ -1.12
DHX40-209ENST00000583439 SEMA3FQ13275 785 aa8.06□□□□□ -1.12
DHX40-209ENST00000583439 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
DHX40-209ENST00000583439 CUEDC1Q9NWM3 386 aaPredicted RBP8.06□□□□□ -1.12
DHX40-209ENST00000583439 TRAK2O60296 914 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 PHKA2P46019 1235 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 WASHC4Q2M389 1173 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 TMEM214Q6NUQ4 689 aaKnown RBP8.05□□□□□ -1.12
DHX40-209ENST00000583439 NBPF10Q6P3W6 841 aaKnown RBP8.05□□□□□ -1.12
DHX40-209ENST00000583439 TAS1R3Q7RTX0 852 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 NBPF15Q8N660 670 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 DYRK1BQ9Y463 629 aa8.05□□□□□ -1.12
DHX40-209ENST00000583439 H7C1W4 665 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 GPR25O00155 361 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
DHX40-209ENST00000583439 MSTNO14793 375 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 CENPCQ03188 943 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 ESCO1Q5FWF5 840 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 ZSCAN10Q96SZ4 725 aaPredicted RBP8.04□□□□□ -1.12
DHX40-209ENST00000583439 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 GRIP2Q9C0E4 1043 aa8.04□□□□□ -1.12
DHX40-209ENST00000583439 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
DHX40-209ENST00000583439 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms