RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
DHX40-209ENST00000583439 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
DHX40-209ENST00000583439 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
DHX40-209ENST00000583439 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
DHX40-209ENST00000583439 FOXD1Q16676 465 aa20.21■□□□□ 0.83
DHX40-209ENST00000583439 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
DHX40-209ENST00000583439 MSH5O43196 834 aa19.23■□□□□ 0.67
DHX40-209ENST00000583439 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
DHX40-209ENST00000583439 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
DHX40-209ENST00000583439 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
DHX40-209ENST00000583439 ADRA2BP18089 450 aa18.26■□□□□ 0.51
DHX40-209ENST00000583439 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
DHX40-209ENST00000583439 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
DHX40-209ENST00000583439 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
DHX40-209ENST00000583439 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
DHX40-209ENST00000583439 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
DHX40-209ENST00000583439 RNF39Q9H2S5 420 aa16.31■□□□□ 0.2
DHX40-209ENST00000583439 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
DHX40-209ENST00000583439 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
DHX40-209ENST00000583439 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
DHX40-209ENST00000583439 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
DHX40-209ENST00000583439 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
DHX40-209ENST00000583439 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
DHX40-209ENST00000583439 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
DHX40-209ENST00000583439 POTEHQ6S545 545 aa15.43■□□□□ 0.06
DHX40-209ENST00000583439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
DHX40-209ENST00000583439 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
DHX40-209ENST00000583439 KCNA4P22459 653 aa15.22■□□□□ 0.03
DHX40-209ENST00000583439 DSG3P32926 999 aa15.05■□□□□ -0
DHX40-209ENST00000583439 U3KPZ7 1027 aaPredicted RBP14.97□□□□□ -0.01
DHX40-209ENST00000583439 CAPN15O75808 1086 aa14.96□□□□□ -0.01
DHX40-209ENST00000583439 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
DHX40-209ENST00000583439 APLP2Q06481 763 aa14.57□□□□□ -0.08
DHX40-209ENST00000583439 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
DHX40-209ENST00000583439 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
DHX40-209ENST00000583439 ABCB7O75027 752 aa14.53□□□□□ -0.08
DHX40-209ENST00000583439 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
DHX40-209ENST00000583439 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
DHX40-209ENST00000583439 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
DHX40-209ENST00000583439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
DHX40-209ENST00000583439 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
DHX40-209ENST00000583439 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
DHX40-209ENST00000583439 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
DHX40-209ENST00000583439 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
DHX40-209ENST00000583439 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
DHX40-209ENST00000583439 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
DHX40-209ENST00000583439 POLA2Q14181 598 aa14.03□□□□□ -0.16
DHX40-209ENST00000583439 ZBTB22O15209 634 aa13.94□□□□□ -0.18
DHX40-209ENST00000583439 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
DHX40-209ENST00000583439 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
DHX40-209ENST00000583439 HAX1O00165 279 aa13.77□□□□□ -0.21
DHX40-209ENST00000583439 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
DHX40-209ENST00000583439 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
DHX40-209ENST00000583439 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
DHX40-209ENST00000583439 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
DHX40-209ENST00000583439 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
DHX40-209ENST00000583439 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
DHX40-209ENST00000583439 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
DHX40-209ENST00000583439 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
DHX40-209ENST00000583439 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
DHX40-209ENST00000583439 EVX2Q03828 476 aa13.51□□□□□ -0.25
DHX40-209ENST00000583439 FBLN2P98095 1184 aa13.33□□□□□ -0.28
DHX40-209ENST00000583439 LHX8Q68G74 356 aa13.28□□□□□ -0.28
DHX40-209ENST00000583439 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
DHX40-209ENST00000583439 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
DHX40-209ENST00000583439 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
DHX40-209ENST00000583439 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
DHX40-209ENST00000583439 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
DHX40-209ENST00000583439 GABBR2O75899 941 aa13.21□□□□□ -0.29
DHX40-209ENST00000583439 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
DHX40-209ENST00000583439 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
DHX40-209ENST00000583439 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
DHX40-209ENST00000583439 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
DHX40-209ENST00000583439 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
DHX40-209ENST00000583439 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
DHX40-209ENST00000583439 PLSCR2Q9NRY7 297 aa12.94□□□□□ -0.34
DHX40-209ENST00000583439 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
DHX40-209ENST00000583439 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
DHX40-209ENST00000583439 CLCN6P51797 869 aa12.87□□□□□ -0.35
DHX40-209ENST00000583439 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
DHX40-209ENST00000583439 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
DHX40-209ENST00000583439 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
DHX40-209ENST00000583439 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
DHX40-209ENST00000583439 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
DHX40-209ENST00000583439 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
DHX40-209ENST00000583439 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
DHX40-209ENST00000583439 POTEMA6NI47 508 aa12.52□□□□□ -0.41
DHX40-209ENST00000583439 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
DHX40-209ENST00000583439 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
DHX40-209ENST00000583439 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
DHX40-209ENST00000583439 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
DHX40-209ENST00000583439 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
DHX40-209ENST00000583439 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
DHX40-209ENST00000583439 FKBP8Q14318 412 aa12.38□□□□□ -0.43
DHX40-209ENST00000583439 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
DHX40-209ENST00000583439 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
DHX40-209ENST00000583439 PROM2Q8N271 834 aa12.28□□□□□ -0.44
DHX40-209ENST00000583439 PELP1Q8IZL8 1130 aaKnown RBP12.27□□□□□ -0.45
DHX40-209ENST00000583439 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
DHX40-209ENST00000583439 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms