RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
ERBB2-215ENST00000583391 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
ERBB2-215ENST00000583391 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
ERBB2-215ENST00000583391 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
ERBB2-215ENST00000583391 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
ERBB2-215ENST00000583391 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
ERBB2-215ENST00000583391 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
ERBB2-215ENST00000583391 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-215ENST00000583391 TATP17735 454 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-215ENST00000583391 DDB1Q16531 1140 aa17.41■□□□□ 0.38
ERBB2-215ENST00000583391 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
ERBB2-215ENST00000583391 TOGARAM1Q9Y4F4 1720 aa17.4■□□□□ 0.38
ERBB2-215ENST00000583391 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
ERBB2-215ENST00000583391 ITGB4P16144 1822 aa17.38■□□□□ 0.37
ERBB2-215ENST00000583391 MIER1Q8N108 512 aa17.38■□□□□ 0.37
ERBB2-215ENST00000583391 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
ERBB2-215ENST00000583391 PLEKHG2Q9H7P9 1386 aa17.38■□□□□ 0.37
ERBB2-215ENST00000583391 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
ERBB2-215ENST00000583391 EXOC5O00471 708 aa17.36■□□□□ 0.37
ERBB2-215ENST00000583391 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
ERBB2-215ENST00000583391 KRT27Q7Z3Y8 459 aa17.36■□□□□ 0.37
ERBB2-215ENST00000583391 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
ERBB2-215ENST00000583391 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
ERBB2-215ENST00000583391 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
ERBB2-215ENST00000583391 ILDR2Q71H61 639 aa17.35■□□□□ 0.37
ERBB2-215ENST00000583391 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
ERBB2-215ENST00000583391 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
ERBB2-215ENST00000583391 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
ERBB2-215ENST00000583391 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
ERBB2-215ENST00000583391 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
ERBB2-215ENST00000583391 CCER2I3L3R5 266 aa17.33■□□□□ 0.36
ERBB2-215ENST00000583391 FCHSD2O94868 740 aa17.33■□□□□ 0.36
ERBB2-215ENST00000583391 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-215ENST00000583391 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-215ENST00000583391 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-215ENST00000583391 BTAF1O14981 1849 aa17.33■□□□□ 0.36
ERBB2-215ENST00000583391 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
ERBB2-215ENST00000583391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERBB2-215ENST00000583391 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
ERBB2-215ENST00000583391 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
ERBB2-215ENST00000583391 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
ERBB2-215ENST00000583391 CYP27B1O15528 508 aa17.31■□□□□ 0.36
ERBB2-215ENST00000583391 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
ERBB2-215ENST00000583391 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
ERBB2-215ENST00000583391 NEFMP07197 916 aa17.3■□□□□ 0.36
ERBB2-215ENST00000583391 PHACTR3Q96KR7 559 aa17.3■□□□□ 0.36
ERBB2-215ENST00000583391 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
ERBB2-215ENST00000583391 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
ERBB2-215ENST00000583391 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
ERBB2-215ENST00000583391 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
ERBB2-215ENST00000583391 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
ERBB2-215ENST00000583391 PHKG2P15735 406 aa17.28■□□□□ 0.36
ERBB2-215ENST00000583391 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
ERBB2-215ENST00000583391 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
ERBB2-215ENST00000583391 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
ERBB2-215ENST00000583391 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-215ENST00000583391 BCL9O00512 1426 aa17.27■□□□□ 0.35
ERBB2-215ENST00000583391 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
ERBB2-215ENST00000583391 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
ERBB2-215ENST00000583391 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
ERBB2-215ENST00000583391 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
ERBB2-215ENST00000583391 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
ERBB2-215ENST00000583391 MRC1P22897 1456 aa17.24■□□□□ 0.35
ERBB2-215ENST00000583391 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
ERBB2-215ENST00000583391 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
ERBB2-215ENST00000583391 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
ERBB2-215ENST00000583391 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
ERBB2-215ENST00000583391 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
ERBB2-215ENST00000583391 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
ERBB2-215ENST00000583391 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
ERBB2-215ENST00000583391 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
ERBB2-215ENST00000583391 LY75O60449 1722 aa17.21■□□□□ 0.35
ERBB2-215ENST00000583391 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
ERBB2-215ENST00000583391 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
ERBB2-215ENST00000583391 TRIM37O94972 964 aa17.21■□□□□ 0.35
ERBB2-215ENST00000583391 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-215ENST00000583391 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
ERBB2-215ENST00000583391 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
ERBB2-215ENST00000583391 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
ERBB2-215ENST00000583391 APAF1O14727 1248 aa17.19■□□□□ 0.34
ERBB2-215ENST00000583391 KCNQ2O43526 872 aa17.19■□□□□ 0.34
ERBB2-215ENST00000583391 PTF1AQ7RTS3 328 aa17.19■□□□□ 0.34
ERBB2-215ENST00000583391 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
ERBB2-215ENST00000583391 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
ERBB2-215ENST00000583391 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
ERBB2-215ENST00000583391 PRIM1P49642 420 aaKnown RBP17.18■□□□□ 0.34
ERBB2-215ENST00000583391 RIPK4P57078 832 aa17.18■□□□□ 0.34
ERBB2-215ENST00000583391 MCM10Q7L590 875 aa17.18■□□□□ 0.34
ERBB2-215ENST00000583391 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
ERBB2-215ENST00000583391 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
ERBB2-215ENST00000583391 RREB1Q92766 1687 aa17.17■□□□□ 0.34
ERBB2-215ENST00000583391 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
ERBB2-215ENST00000583391 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
ERBB2-215ENST00000583391 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-215ENST00000583391 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
ERBB2-215ENST00000583391 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
ERBB2-215ENST00000583391 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
ERBB2-215ENST00000583391 CABP4P57796 275 aa17.15■□□□□ 0.34
ERBB2-215ENST00000583391 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
ERBB2-215ENST00000583391 IL17REQ8NFR9 667 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms