RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 VRTNQ9H8Y1 702 aa10.53□□□□□ -0.72
SMARCE1-219ENST00000583294 CHIC2Q9UKJ5 165 aa10.53□□□□□ -0.72
SMARCE1-219ENST00000583294 MAP4K5Q9Y4K4 846 aa10.53□□□□□ -0.72
SMARCE1-219ENST00000583294 PCDHB11Q9Y5F2 797 aa10.53□□□□□ -0.72
SMARCE1-219ENST00000583294 TERTO14746 1132 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 FSHRP23945 695 aa10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 MAP7D1Q3KQU3 841 aa10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
SMARCE1-219ENST00000583294 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 NR5A1Q13285 461 aa10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 ITPKCQ96DU7 683 aa10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 MKRN1Q9UHC7 482 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-219ENST00000583294 EML3Q32P44 896 aa10.5□□□□□ -0.73
SMARCE1-219ENST00000583294 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
SMARCE1-219ENST00000583294 ERVH48-1M5A8F1 160 aa10.49□□□□□ -0.73
SMARCE1-219ENST00000583294 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
SMARCE1-219ENST00000583294 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-219ENST00000583294 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-219ENST00000583294 TMPRSS4Q9NRS4 437 aa10.47□□□□□ -0.73
SMARCE1-219ENST00000583294 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
SMARCE1-219ENST00000583294 RASA1P20936 1047 aa10.46□□□□□ -0.73
SMARCE1-219ENST00000583294 SCARF1Q14162 830 aa10.46□□□□□ -0.73
SMARCE1-219ENST00000583294 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
SMARCE1-219ENST00000583294 ATG7O95352 703 aa10.45□□□□□ -0.74
SMARCE1-219ENST00000583294 VEGFBP49765 207 aa10.45□□□□□ -0.74
SMARCE1-219ENST00000583294 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-219ENST00000583294 SOBPA7XYQ1 873 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 SCTRP47872 440 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 USP4Q13107 963 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 C6orf118Q5T5N4 469 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 LARP1Q6PKG0 1096 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 CYLDQ9NQC7 956 aa10.44□□□□□ -0.74
SMARCE1-219ENST00000583294 DHX9Q08211 1270 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-219ENST00000583294 PPP1R26Q5T8A7 1209 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-219ENST00000583294 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
SMARCE1-219ENST00000583294 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-219ENST00000583294 ESF1Q9H501 851 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-219ENST00000583294 CARNS1A5YM72 827 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L21D6R901 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 MYCP01106 439 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 GTF2IP78347 998 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 CLDN10P78369 228 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 ZNF784Q8NCA9 323 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 DNAAF2Q9NVR5 837 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-219ENST00000583294 WIPF1O43516 503 aa10.41□□□□□ -0.74
SMARCE1-219ENST00000583294 PSME1Q06323 249 aa10.41□□□□□ -0.74
SMARCE1-219ENST00000583294 PTK7Q13308 1070 aa10.41□□□□□ -0.74
SMARCE1-219ENST00000583294 NOVA2Q9UNW9 492 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-219ENST00000583294 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 ATP1A2P50993 1020 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 MEIOBQ8N635 442 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 SLC16A10Q8TF71 515 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 ZMIZ1Q9ULJ6 1067 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
SMARCE1-219ENST00000583294 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 BMP2P12643 396 aa10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 STK32AQ8WU08 396 aa10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 PCDHGA11Q9Y5H2 935 aa10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
SMARCE1-219ENST00000583294 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
SMARCE1-219ENST00000583294 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
SMARCE1-219ENST00000583294 LILRA1O75019 489 aa10.37□□□□□ -0.75
SMARCE1-219ENST00000583294 DPYDQ12882 1025 aa10.37□□□□□ -0.75
SMARCE1-219ENST00000583294 TMEM164Q5U3C3 297 aa10.37□□□□□ -0.75
SMARCE1-219ENST00000583294 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
SMARCE1-219ENST00000583294 TPCN2Q8NHX9 752 aa10.37□□□□□ -0.75
SMARCE1-219ENST00000583294 UPP2O95045 317 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 CBLBQ13191 982 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 ELOAQ14241 798 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 NPAS3Q8IXF0 933 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
SMARCE1-219ENST00000583294 OSBPL3Q9H4L5 887 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms