RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 BRWD3Q6RI45 1802 aa16.6■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 DDB1Q16531 1140 aa16.59■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 ANP32CO43423 234 aa16.58■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 RGPD1P0DJD0 1748 aa16.57■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 MEGF6O75095 1541 aa16.57■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 EXOC5O00471 708 aa16.56■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 ZBTB22O15209 634 aa16.56■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 KDRP35968 1356 aa16.53■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
CCDC144NL-AS1-216ENST00000582583 HMOX1P09601 288 aa16.52■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 PLEKHG2Q9H7P9 1386 aa16.5■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 EP400Q96L91 3159 aa16.49■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 PCDH11XQ9BZA7 1347 aa16.48■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 PCDH11YQ9BZA8 1340 aa16.48■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
CCDC144NL-AS1-216ENST00000582583 CYP27B1O15528 508 aa16.45■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 BCL9O00512 1426 aa16.45■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 FCHSD2O94868 740 aa16.44■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 SOCS7O14512 581 aa16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 PHKG2P15735 406 aa16.42■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 TRIM37O94972 964 aa16.41■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 ACSBG1Q96GR2 724 aa16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
CCDC144NL-AS1-216ENST00000582583 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 NEFMP07197 916 aa16.39■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 SF3B2Q13435 895 aaKnown RBP16.39■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 KCNQ2O43526 872 aa16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 APBA3O96018 575 aa16.34■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 BAG6P46379 1132 aa16.34■□□□□ 0.21
CCDC144NL-AS1-216ENST00000582583 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 BTAF1O14981 1849 aa16.32■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 ITGB4P16144 1822 aa16.32■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
CCDC144NL-AS1-216ENST00000582583 LGR6Q9HBX8 967 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms