RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 ZBTB33Q86T24 672 aa9.06□□□□□ -0.96
TRAPPC8-206ENST00000578886 ZNF784Q8NCA9 323 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC8-206ENST00000578886 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
TRAPPC8-206ENST00000578886 PTGIRP43119 386 aa9.04□□□□□ -0.96
TRAPPC8-206ENST00000578886 ALYREFQ86V81 257 aaKnown RBP9.04□□□□□ -0.96
TRAPPC8-206ENST00000578886 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC8-206ENST00000578886 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
TRAPPC8-206ENST00000578886 TMPRSS4Q9NRS4 437 aa9.03□□□□□ -0.96
TRAPPC8-206ENST00000578886 FKBPLQ9UIM3 349 aa9.03□□□□□ -0.96
TRAPPC8-206ENST00000578886 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
TRAPPC8-206ENST00000578886 KRBA1A5PL33 1030 aa9.02□□□□□ -0.97
TRAPPC8-206ENST00000578886 FURINP09958 794 aa9.02□□□□□ -0.97
TRAPPC8-206ENST00000578886 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC8-206ENST00000578886 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
TRAPPC8-206ENST00000578886 OIP5O43482 229 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 LILRA1O75019 489 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 RHOQP17081 205 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 DBN1Q16643 649 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 PRICKLE2Q7Z3G6 844 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 NSFL1CQ9UNZ2 370 aaKnown RBP9.01□□□□□ -0.97
TRAPPC8-206ENST00000578886 H7C1W4 665 aa9□□□□□ -0.97
TRAPPC8-206ENST00000578886 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
TRAPPC8-206ENST00000578886 RIPOR1Q6ZS17 1223 aa9□□□□□ -0.97
TRAPPC8-206ENST00000578886 GTPBP3Q969Y2 492 aaKnown RBP9□□□□□ -0.97
TRAPPC8-206ENST00000578886 MX2P20592 715 aa8.99□□□□□ -0.97
TRAPPC8-206ENST00000578886 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
TRAPPC8-206ENST00000578886 SNRPNP63162 240 aaKnown RBP8.99□□□□□ -0.97
TRAPPC8-206ENST00000578886 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
TRAPPC8-206ENST00000578886 MKL2Q9ULH7 1088 aa8.99□□□□□ -0.97
TRAPPC8-206ENST00000578886 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
TRAPPC8-206ENST00000578886 RAB15P59190 212 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 PTK2Q05397 1052 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 OCSTAMPQ9BR26 566 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 DYRK1BQ9Y463 629 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 GPSM3Q9Y4H4 160 aa8.97□□□□□ -0.97
TRAPPC8-206ENST00000578886 ERVH48-1M5A8F1 160 aa8.96□□□□□ -0.98
TRAPPC8-206ENST00000578886 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
TRAPPC8-206ENST00000578886 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
TRAPPC8-206ENST00000578886 OXCT2Q9BYC2 517 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC8-206ENST00000578886 COL8A1P27658 744 aa8.95□□□□□ -0.98
TRAPPC8-206ENST00000578886 GPC1P35052 558 aa8.95□□□□□ -0.98
TRAPPC8-206ENST00000578886 MAP2K3P46734 347 aa8.95□□□□□ -0.98
TRAPPC8-206ENST00000578886 CTDSPL2Q05D32 466 aa8.95□□□□□ -0.98
TRAPPC8-206ENST00000578886 KRTAP1-3Q8IUG1 177 aa8.95□□□□□ -0.98
TRAPPC8-206ENST00000578886 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
TRAPPC8-206ENST00000578886 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAPPC8-206ENST00000578886 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
TRAPPC8-206ENST00000578886 GAS2L1Q99501 681 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC8-206ENST00000578886 SHISA8B8ZZ34 492 aa8.92□□□□□ -0.98
TRAPPC8-206ENST00000578886 ESPNB1AK53 854 aa8.91□□□□□ -0.98
TRAPPC8-206ENST00000578886 NR6A1Q15406 480 aa8.91□□□□□ -0.98
TRAPPC8-206ENST00000578886 LRRN4Q8WUT4 740 aa8.91□□□□□ -0.98
TRAPPC8-206ENST00000578886 CYLDQ9NQC7 956 aa8.91□□□□□ -0.98
TRAPPC8-206ENST00000578886 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
TRAPPC8-206ENST00000578886 GRIN2CQ14957 1233 aa8.9□□□□□ -0.98
TRAPPC8-206ENST00000578886 NUCKS1Q9H1E3 243 aaKnown RBP8.9□□□□□ -0.98
TRAPPC8-206ENST00000578886 RRAGCQ9HB90 399 aa8.9□□□□□ -0.98
TRAPPC8-206ENST00000578886 PPP2R2DQ66LE6 453 aa8.89□□□□□ -0.99
TRAPPC8-206ENST00000578886 DZIP3Q86Y13 1208 aaKnown RBP8.89□□□□□ -0.99
TRAPPC8-206ENST00000578886 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
TRAPPC8-206ENST00000578886 MEN1O00255 615 aa8.88□□□□□ -0.99
TRAPPC8-206ENST00000578886 GDF2Q9UK05 429 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC8-206ENST00000578886 PIK3R2O00459 728 aa8.87□□□□□ -0.99
TRAPPC8-206ENST00000578886 POU4F2Q12837 409 aa8.87□□□□□ -0.99
TRAPPC8-206ENST00000578886 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
TRAPPC8-206ENST00000578886 C1QTNF9BB2RNN3 333 aa8.86□□□□□ -0.99
TRAPPC8-206ENST00000578886 ITGB7P26010 798 aa8.86□□□□□ -0.99
TRAPPC8-206ENST00000578886 SLC27A3Q5K4L6 730 aa8.86□□□□□ -0.99
TRAPPC8-206ENST00000578886 C1orf229Q6ZS94 237 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC8-206ENST00000578886 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
TRAPPC8-206ENST00000578886 WDR44Q5JSH3 913 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 EDARADDQ8WWZ3 215 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 KLRG1Q96E93 195 aa8.85□□□□□ -0.99
TRAPPC8-206ENST00000578886 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 F11P03951 625 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 LCE3BQ5TA77 95 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 CD163Q86VB7 1156 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 PHF24Q9UPV7 400 aa8.84□□□□□ -0.99
TRAPPC8-206ENST00000578886 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
TRAPPC8-206ENST00000578886 GNB5O14775 395 aa8.83□□□□□ -1
TRAPPC8-206ENST00000578886 ZMYM1Q5SVZ6 1142 aa8.83□□□□□ -1
TRAPPC8-206ENST00000578886 NLRP3Q96P20 1036 aa8.83□□□□□ -1
TRAPPC8-206ENST00000578886 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
TRAPPC8-206ENST00000578886 HOXB4P17483 251 aaPredicted RBP8.82□□□□□ -1
TRAPPC8-206ENST00000578886 AMPD1P23109 780 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms