RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
TRAPPC8-206ENST00000578886 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
TRAPPC8-206ENST00000578886 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
TRAPPC8-206ENST00000578886 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC8-206ENST00000578886 FOXD1Q16676 465 aa23.32■■□□□ 1.32
TRAPPC8-206ENST00000578886 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
TRAPPC8-206ENST00000578886 MSH5O43196 834 aa22.07■■□□□ 1.12
TRAPPC8-206ENST00000578886 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC8-206ENST00000578886 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
TRAPPC8-206ENST00000578886 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
TRAPPC8-206ENST00000578886 ADRA2BP18089 450 aa21.3■■□□□ 1
TRAPPC8-206ENST00000578886 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
TRAPPC8-206ENST00000578886 MAPK8IP2Q13387 824 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC8-206ENST00000578886 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
TRAPPC8-206ENST00000578886 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC8-206ENST00000578886 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
TRAPPC8-206ENST00000578886 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC8-206ENST00000578886 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
TRAPPC8-206ENST00000578886 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
TRAPPC8-206ENST00000578886 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
TRAPPC8-206ENST00000578886 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC8-206ENST00000578886 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
TRAPPC8-206ENST00000578886 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
TRAPPC8-206ENST00000578886 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
TRAPPC8-206ENST00000578886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
TRAPPC8-206ENST00000578886 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
TRAPPC8-206ENST00000578886 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC8-206ENST00000578886 POTEHQ6S545 545 aa17.41■□□□□ 0.38
TRAPPC8-206ENST00000578886 CAPN15O75808 1086 aa17.39■□□□□ 0.37
TRAPPC8-206ENST00000578886 DSG3P32926 999 aa17.39■□□□□ 0.37
TRAPPC8-206ENST00000578886 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC8-206ENST00000578886 APLP2Q06481 763 aa17.02■□□□□ 0.32
TRAPPC8-206ENST00000578886 SLC4A2P04920 1241 aa17■□□□□ 0.31
TRAPPC8-206ENST00000578886 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC8-206ENST00000578886 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC8-206ENST00000578886 ABCB7O75027 752 aa16.92■□□□□ 0.3
TRAPPC8-206ENST00000578886 KCNA4P22459 653 aa16.9■□□□□ 0.3
TRAPPC8-206ENST00000578886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC8-206ENST00000578886 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
TRAPPC8-206ENST00000578886 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC8-206ENST00000578886 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
TRAPPC8-206ENST00000578886 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
TRAPPC8-206ENST00000578886 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC8-206ENST00000578886 POLA2Q14181 598 aa16.4■□□□□ 0.22
TRAPPC8-206ENST00000578886 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
TRAPPC8-206ENST00000578886 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC8-206ENST00000578886 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC8-206ENST00000578886 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
TRAPPC8-206ENST00000578886 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC8-206ENST00000578886 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
TRAPPC8-206ENST00000578886 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
TRAPPC8-206ENST00000578886 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
TRAPPC8-206ENST00000578886 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-206ENST00000578886 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
TRAPPC8-206ENST00000578886 HAX1O00165 279 aa15.78■□□□□ 0.12
TRAPPC8-206ENST00000578886 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAPPC8-206ENST00000578886 SPDYE2BA6NHP3 402 aa15.54■□□□□ 0.08
TRAPPC8-206ENST00000578886 SPDYE6P0CI01 402 aa15.54■□□□□ 0.08
TRAPPC8-206ENST00000578886 SPDYE2Q495Y8 402 aa15.54■□□□□ 0.08
TRAPPC8-206ENST00000578886 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
TRAPPC8-206ENST00000578886 ZBTB22O15209 634 aa15.52■□□□□ 0.08
TRAPPC8-206ENST00000578886 EVX2Q03828 476 aa15.5■□□□□ 0.07
TRAPPC8-206ENST00000578886 FBLN2P98095 1184 aa15.48■□□□□ 0.07
TRAPPC8-206ENST00000578886 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
TRAPPC8-206ENST00000578886 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC8-206ENST00000578886 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
TRAPPC8-206ENST00000578886 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
TRAPPC8-206ENST00000578886 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
TRAPPC8-206ENST00000578886 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC8-206ENST00000578886 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC8-206ENST00000578886 GABBR2O75899 941 aa15.16■□□□□ 0.02
TRAPPC8-206ENST00000578886 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
TRAPPC8-206ENST00000578886 LHX8Q68G74 356 aa15.07■□□□□ 0
TRAPPC8-206ENST00000578886 PRR29P0C7W0 189 aa15.04■□□□□ -0
TRAPPC8-206ENST00000578886 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAPPC8-206ENST00000578886 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
TRAPPC8-206ENST00000578886 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC8-206ENST00000578886 CLCN6P51797 869 aa14.83□□□□□ -0.04
TRAPPC8-206ENST00000578886 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
TRAPPC8-206ENST00000578886 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
TRAPPC8-206ENST00000578886 ZNF579Q8NAF0 562 aaKnown RBP14.66□□□□□ -0.06
TRAPPC8-206ENST00000578886 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
TRAPPC8-206ENST00000578886 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
TRAPPC8-206ENST00000578886 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
TRAPPC8-206ENST00000578886 PLSCR2Q9NRY7 297 aa14.5□□□□□ -0.09
TRAPPC8-206ENST00000578886 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC8-206ENST00000578886 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC8-206ENST00000578886 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
TRAPPC8-206ENST00000578886 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
TRAPPC8-206ENST00000578886 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
TRAPPC8-206ENST00000578886 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
TRAPPC8-206ENST00000578886 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
TRAPPC8-206ENST00000578886 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC8-206ENST00000578886 POTEMA6NI47 508 aa14.23□□□□□ -0.13
TRAPPC8-206ENST00000578886 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC8-206ENST00000578886 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
TRAPPC8-206ENST00000578886 ASTLQ6HA08 431 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC8-206ENST00000578886 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
TRAPPC8-206ENST00000578886 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
TRAPPC8-206ENST00000578886 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms