RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
KRT39-202ENST00000578029 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
KRT39-202ENST00000578029 LOC105371045A0A1W2PR82 267 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 H3BRB1 525 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 ICMTO60725 284 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 NYAP1Q6ZVC0 841 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 GLYCTKQ8IVS8 523 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 SEPT12Q8IYM1 358 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 GIPC2Q8TF65 315 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 BAP1Q92560 729 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
KRT39-202ENST00000578029 TUT1Q9H6E5 874 aaKnown RBP7.57□□□□□ -1.2
KRT39-202ENST00000578029 KIAA1522Q9P206 1035 aaPredicted RBP7.57□□□□□ -1.2
KRT39-202ENST00000578029 TLL1O43897 1013 aa7.56□□□□□ -1.2
KRT39-202ENST00000578029 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
KRT39-202ENST00000578029 NPAS4Q8IUM7 802 aa7.56□□□□□ -1.2
KRT39-202ENST00000578029 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
KRT39-202ENST00000578029 ESPNB1AK53 854 aa7.55□□□□□ -1.2
KRT39-202ENST00000578029 M0R2N6 131 aa7.55□□□□□ -1.2
KRT39-202ENST00000578029 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
KRT39-202ENST00000578029 FOXJ1Q92949 421 aa7.55□□□□□ -1.2
KRT39-202ENST00000578029 C21orf2O43822 256 aa7.54□□□□□ -1.2
KRT39-202ENST00000578029 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
KRT39-202ENST00000578029 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
KRT39-202ENST00000578029 ZNF211Q13398 564 aaPredicted RBP7.54□□□□□ -1.2
KRT39-202ENST00000578029 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
KRT39-202ENST00000578029 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
KRT39-202ENST00000578029 THSD4Q6ZMP0 1018 aa7.54□□□□□ -1.2
KRT39-202ENST00000578029 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
KRT39-202ENST00000578029 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
KRT39-202ENST00000578029 MAPK1P28482 360 aa7.53□□□□□ -1.2
KRT39-202ENST00000578029 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
KRT39-202ENST00000578029 ZSCAN29Q8IWY8 852 aaPredicted RBP7.53□□□□□ -1.2
KRT39-202ENST00000578029 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
KRT39-202ENST00000578029 C1QTNF2Q9BXJ5 285 aa7.53□□□□□ -1.2
KRT39-202ENST00000578029 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
KRT39-202ENST00000578029 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
KRT39-202ENST00000578029 DCTN4Q9UJW0 460 aa7.53□□□□□ -1.2
KRT39-202ENST00000578029 WEE1P30291 646 aa7.52□□□□□ -1.21
KRT39-202ENST00000578029 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
KRT39-202ENST00000578029 ASB16Q96NS5 453 aa7.52□□□□□ -1.21
KRT39-202ENST00000578029 MTRQ99707 1265 aa7.52□□□□□ -1.21
KRT39-202ENST00000578029 IL21Q9HBE4 155 aa7.52□□□□□ -1.21
KRT39-202ENST00000578029 VAMP1P23763 118 aa7.51□□□□□ -1.21
KRT39-202ENST00000578029 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
KRT39-202ENST00000578029 COL26A1Q96A83 441 aa7.51□□□□□ -1.21
KRT39-202ENST00000578029 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
KRT39-202ENST00000578029 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
KRT39-202ENST00000578029 SEPT3Q9UH03 358 aa7.51□□□□□ -1.21
KRT39-202ENST00000578029 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
KRT39-202ENST00000578029 LGR5O75473 907 aa7.5□□□□□ -1.21
KRT39-202ENST00000578029 TCF3P15923 654 aa7.5□□□□□ -1.21
KRT39-202ENST00000578029 MYT1Q01538 1121 aa7.5□□□□□ -1.21
KRT39-202ENST00000578029 FKBP5Q13451 457 aaPredicted RBP7.5□□□□□ -1.21
KRT39-202ENST00000578029 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
KRT39-202ENST00000578029 RNF166Q96A37 237 aaPredicted RBP7.5□□□□□ -1.21
KRT39-202ENST00000578029 TRIM52Q96A61 297 aa7.5□□□□□ -1.21
KRT39-202ENST00000578029 KCTD12Q96CX2 325 aaKnown RBP7.5□□□□□ -1.21
KRT39-202ENST00000578029 IGFBP4P22692 258 aa7.49□□□□□ -1.21
KRT39-202ENST00000578029 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
KRT39-202ENST00000578029 FCF1Q9Y324 198 aaKnown RBP7.49□□□□□ -1.21
KRT39-202ENST00000578029 FOXO3O43524 673 aa7.48□□□□□ -1.21
KRT39-202ENST00000578029 SH3BP2P78314 561 aa7.48□□□□□ -1.21
KRT39-202ENST00000578029 ECM1Q16610 540 aa7.48□□□□□ -1.21
KRT39-202ENST00000578029 FBXO33Q7Z6M2 555 aa7.48□□□□□ -1.21
KRT39-202ENST00000578029 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
KRT39-202ENST00000578029 ZNF358Q9NW07 568 aa7.48□□□□□ -1.21
KRT39-202ENST00000578029 BACH1O14867 736 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 FAM13AO94988 1023 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 S1PR4O95977 384 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 RAB15P59190 212 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 TJAP1Q5JTD0 557 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 ZNF516Q92618 1163 aa7.47□□□□□ -1.21
KRT39-202ENST00000578029 ZBTB24O43167 697 aaPredicted RBP7.46□□□□□ -1.22
KRT39-202ENST00000578029 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
KRT39-202ENST00000578029 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.22
KRT39-202ENST00000578029 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
KRT39-202ENST00000578029 RGL4Q8IZJ4 473 aa7.46□□□□□ -1.22
KRT39-202ENST00000578029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.46□□□□□ -1.22
KRT39-202ENST00000578029 NPR3P17342 541 aa7.45□□□□□ -1.22
KRT39-202ENST00000578029 VARSP26640 1264 aaKnown RBP7.45□□□□□ -1.22
KRT39-202ENST00000578029 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
KRT39-202ENST00000578029 INTS6LQ5JSJ4 861 aaKnown RBP7.45□□□□□ -1.22
KRT39-202ENST00000578029 VASH1Q7L8A9 365 aaPredicted RBP7.45□□□□□ -1.22
KRT39-202ENST00000578029 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
KRT39-202ENST00000578029 VTI1AQ96AJ9 217 aa7.45□□□□□ -1.22
KRT39-202ENST00000578029 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
KRT39-202ENST00000578029 MAP4K5Q9Y4K4 846 aa7.45□□□□□ -1.22
KRT39-202ENST00000578029 TMEM229AB2RXF0 380 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 SCTRP47872 440 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 ERVK-9P63128 1117 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 CC2D2BQ6DHV5 1058 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 SCG3Q8WXD2 468 aaKnown RBP7.44□□□□□ -1.22
KRT39-202ENST00000578029 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
KRT39-202ENST00000578029 WASLO00401 505 aaPredicted RBP7.43□□□□□ -1.22
KRT39-202ENST00000578029 TAGLNQ01995 201 aaKnown RBP7.43□□□□□ -1.22
KRT39-202ENST00000578029 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms