RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-205ENST00000577667 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
PPP4R1-205ENST00000577667 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
PPP4R1-205ENST00000577667 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
PPP4R1-205ENST00000577667 IGHA1P01876 353 aa7.79□□□□□ -1.16
PPP4R1-205ENST00000577667 PTGIRP43119 386 aa7.79□□□□□ -1.16
PPP4R1-205ENST00000577667 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
PPP4R1-205ENST00000577667 COL25A1Q9BXS0 654 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-205ENST00000577667 DNMT3AQ9Y6K1 912 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-205ENST00000577667 PTSQ03393 145 aa7.78□□□□□ -1.16
PPP4R1-205ENST00000577667 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-205ENST00000577667 WHAMMQ8TF30 809 aa7.78□□□□□ -1.16
PPP4R1-205ENST00000577667 ARHGEF15O94989 841 aa7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 IRS1P35568 1242 aa7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 RNFT1Q5M7Z0 435 aa7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 NANOS1Q8WY41 292 aaKnown RBP7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 PCDHB11Q9Y5F2 797 aa7.77□□□□□ -1.17
PPP4R1-205ENST00000577667 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 IRF5Q13568 498 aa7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 XP32Q5T750 250 aa7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 CC2D2BQ6DHV5 1058 aa7.76□□□□□ -1.17
PPP4R1-205ENST00000577667 SLURP2P0DP57 97 aa7.75□□□□□ -1.17
PPP4R1-205ENST00000577667 MCM6Q14566 821 aa7.75□□□□□ -1.17
PPP4R1-205ENST00000577667 GDPD2Q9HCC8 539 aa7.75□□□□□ -1.17
PPP4R1-205ENST00000577667 ABL2P42684 1182 aa7.74□□□□□ -1.17
PPP4R1-205ENST00000577667 SCTRP47872 440 aa7.74□□□□□ -1.17
PPP4R1-205ENST00000577667 SVOPQ8N4V2 548 aa7.74□□□□□ -1.17
PPP4R1-205ENST00000577667 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
PPP4R1-205ENST00000577667 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
PPP4R1-205ENST00000577667 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
PPP4R1-205ENST00000577667 FOXK2Q01167 660 aa7.73□□□□□ -1.17
PPP4R1-205ENST00000577667 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 MEN1O00255 615 aa7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 VAC14Q08AM6 782 aa7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 KANK3Q6NY19 840 aa7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 CYP2U1Q7Z449 544 aa7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-205ENST00000577667 A0A1W2PRU2 124 aa7.71□□□□□ -1.18
PPP4R1-205ENST00000577667 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
PPP4R1-205ENST00000577667 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
PPP4R1-205ENST00000577667 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
PPP4R1-205ENST00000577667 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
PPP4R1-205ENST00000577667 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
PPP4R1-205ENST00000577667 TRAK2O60296 914 aa7.7□□□□□ -1.18
PPP4R1-205ENST00000577667 MARSP56192 900 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-205ENST00000577667 ITGA6P23229 1130 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 GPC1P35052 558 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 CLN3Q13286 438 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 PRICKLE2Q7Z3G6 844 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 ARHGEF10LQ9HCE6 1279 aa7.69□□□□□ -1.18
PPP4R1-205ENST00000577667 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 RHOQP17081 205 aa7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 DOLKQ9UPQ8 538 aa7.68□□□□□ -1.18
PPP4R1-205ENST00000577667 CDC14CA4D256 554 aa7.67□□□□□ -1.18
PPP4R1-205ENST00000577667 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
PPP4R1-205ENST00000577667 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
PPP4R1-205ENST00000577667 ADAM23O75077 832 aa7.66□□□□□ -1.18
PPP4R1-205ENST00000577667 GNRH1P01148 92 aa7.66□□□□□ -1.18
PPP4R1-205ENST00000577667 PHTF2Q8N3S3 785 aa7.66□□□□□ -1.18
PPP4R1-205ENST00000577667 TSGA10IPQ3SY00 556 aa7.65□□□□□ -1.18
PPP4R1-205ENST00000577667 OXLD1Q5BKU9 147 aa7.65□□□□□ -1.18
PPP4R1-205ENST00000577667 LYPD4Q6UWN0 246 aa7.65□□□□□ -1.18
PPP4R1-205ENST00000577667 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
PPP4R1-205ENST00000577667 SOX11P35716 441 aa7.64□□□□□ -1.19
PPP4R1-205ENST00000577667 SEMA3FQ13275 785 aa7.64□□□□□ -1.19
PPP4R1-205ENST00000577667 SV2AQ7L0J3 742 aa7.64□□□□□ -1.19
PPP4R1-205ENST00000577667 CNKSR1Q969H4 720 aa7.64□□□□□ -1.19
PPP4R1-205ENST00000577667 GRIP2Q9C0E4 1043 aa7.64□□□□□ -1.19
PPP4R1-205ENST00000577667 IL2RAP01589 272 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 ITGB2P05107 769 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 POU4F2Q12837 409 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 USP4Q13107 963 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 ESYT1Q9BSJ8 1104 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
PPP4R1-205ENST00000577667 MSTNO14793 375 aa7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 ADAMTS2O95450 1211 aa7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 PLA2G4EQ3MJ16 856 aa7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 WWC1Q8IX03 1113 aa7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
PPP4R1-205ENST00000577667 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
PPP4R1-205ENST00000577667 FLIIQ13045 1269 aa7.61□□□□□ -1.19
PPP4R1-205ENST00000577667 PLPP7Q8NBV4 271 aa7.61□□□□□ -1.19
PPP4R1-205ENST00000577667 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
PPP4R1-205ENST00000577667 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
PPP4R1-205ENST00000577667 WASLO00401 505 aaPredicted RBP7.6□□□□□ -1.19
PPP4R1-205ENST00000577667 RAD21O60216 631 aa7.6□□□□□ -1.19
PPP4R1-205ENST00000577667 CELA2BP08218 269 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms