RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-205ENST00000577667 AEBP2Q6ZN18 517 aaPredicted RBP24.08■■□□□ 1.45
PPP4R1-205ENST00000577667 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
PPP4R1-205ENST00000577667 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
PPP4R1-205ENST00000577667 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
PPP4R1-205ENST00000577667 FOXD1Q16676 465 aa19.24■□□□□ 0.67
PPP4R1-205ENST00000577667 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
PPP4R1-205ENST00000577667 MSH5O43196 834 aa18.09■□□□□ 0.49
PPP4R1-205ENST00000577667 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
PPP4R1-205ENST00000577667 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
PPP4R1-205ENST00000577667 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
PPP4R1-205ENST00000577667 ADRA2BP18089 450 aa17.61■□□□□ 0.41
PPP4R1-205ENST00000577667 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-205ENST00000577667 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
PPP4R1-205ENST00000577667 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-205ENST00000577667 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
PPP4R1-205ENST00000577667 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
PPP4R1-205ENST00000577667 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
PPP4R1-205ENST00000577667 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
PPP4R1-205ENST00000577667 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
PPP4R1-205ENST00000577667 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
PPP4R1-205ENST00000577667 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
PPP4R1-205ENST00000577667 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-205ENST00000577667 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
PPP4R1-205ENST00000577667 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
PPP4R1-205ENST00000577667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
PPP4R1-205ENST00000577667 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
PPP4R1-205ENST00000577667 KCNA4P22459 653 aa14.49□□□□□ -0.09
PPP4R1-205ENST00000577667 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1-205ENST00000577667 DSG3P32926 999 aa14.33□□□□□ -0.12
PPP4R1-205ENST00000577667 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-205ENST00000577667 POTEHQ6S545 545 aa14.32□□□□□ -0.12
PPP4R1-205ENST00000577667 CAPN15O75808 1086 aa14.27□□□□□ -0.13
PPP4R1-205ENST00000577667 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
PPP4R1-205ENST00000577667 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
PPP4R1-205ENST00000577667 ABCB7O75027 752 aa13.92□□□□□ -0.18
PPP4R1-205ENST00000577667 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-205ENST00000577667 APLP2Q06481 763 aa13.87□□□□□ -0.19
PPP4R1-205ENST00000577667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-205ENST00000577667 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-205ENST00000577667 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-205ENST00000577667 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-205ENST00000577667 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-205ENST00000577667 POLA2Q14181 598 aa13.52□□□□□ -0.25
PPP4R1-205ENST00000577667 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
PPP4R1-205ENST00000577667 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-205ENST00000577667 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
PPP4R1-205ENST00000577667 ZBTB22O15209 634 aa13.33□□□□□ -0.28
PPP4R1-205ENST00000577667 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
PPP4R1-205ENST00000577667 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-205ENST00000577667 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-205ENST00000577667 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-205ENST00000577667 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-205ENST00000577667 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
PPP4R1-205ENST00000577667 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
PPP4R1-205ENST00000577667 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
PPP4R1-205ENST00000577667 PITPNM1O00562 1244 aa13□□□□□ -0.33
PPP4R1-205ENST00000577667 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.333e-9■■■■■ 34.7
PPP4R1-205ENST00000577667 HAX1O00165 279 aa12.99□□□□□ -0.33
PPP4R1-205ENST00000577667 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
PPP4R1-205ENST00000577667 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
PPP4R1-205ENST00000577667 EVX2Q03828 476 aa12.87□□□□□ -0.35
PPP4R1-205ENST00000577667 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
PPP4R1-205ENST00000577667 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
PPP4R1-205ENST00000577667 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
PPP4R1-205ENST00000577667 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-205ENST00000577667 FBLN2P98095 1184 aa12.66□□□□□ -0.38
PPP4R1-205ENST00000577667 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-205ENST00000577667 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
PPP4R1-205ENST00000577667 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-205ENST00000577667 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
PPP4R1-205ENST00000577667 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
PPP4R1-205ENST00000577667 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-205ENST00000577667 GABBR2O75899 941 aa12.51□□□□□ -0.41
PPP4R1-205ENST00000577667 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
PPP4R1-205ENST00000577667 LHX8Q68G74 356 aa12.41□□□□□ -0.42
PPP4R1-205ENST00000577667 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
PPP4R1-205ENST00000577667 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
PPP4R1-205ENST00000577667 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
PPP4R1-205ENST00000577667 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-205ENST00000577667 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-205ENST00000577667 CLCN6P51797 869 aa12.13□□□□□ -0.47
PPP4R1-205ENST00000577667 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
PPP4R1-205ENST00000577667 DCBLD2Q96PD2 775 aa12.04□□□□□ -0.48
PPP4R1-205ENST00000577667 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-205ENST00000577667 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
PPP4R1-205ENST00000577667 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
PPP4R1-205ENST00000577667 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-205ENST00000577667 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
PPP4R1-205ENST00000577667 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
PPP4R1-205ENST00000577667 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
PPP4R1-205ENST00000577667 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
PPP4R1-205ENST00000577667 PROM2Q8N271 834 aa11.8□□□□□ -0.52
PPP4R1-205ENST00000577667 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
PPP4R1-205ENST00000577667 FKBP8Q14318 412 aa11.78□□□□□ -0.52
PPP4R1-205ENST00000577667 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-205ENST00000577667 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
PPP4R1-205ENST00000577667 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
PPP4R1-205ENST00000577667 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
PPP4R1-205ENST00000577667 POTEMA6NI47 508 aa11.69□□□□□ -0.54
PPP4R1-205ENST00000577667 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms