RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 QPCTQ16769 361 aa7.77□□□□□ -1.17
TOP2A-202ENST00000577541 RIC3Q7Z5B4 369 aa7.77□□□□□ -1.17
TOP2A-202ENST00000577541 OXCT2Q9BYC2 517 aaPredicted RBP7.77□□□□□ -1.17
TOP2A-202ENST00000577541 RRAGCQ9HB90 399 aa7.77□□□□□ -1.17
TOP2A-202ENST00000577541 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
TOP2A-202ENST00000577541 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
TOP2A-202ENST00000577541 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 LILRA1O75019 489 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 HOXB4P17483 251 aaPredicted RBP7.75□□□□□ -1.17
TOP2A-202ENST00000577541 MAP2K3P46734 347 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 RNF144AP50876 292 aaPredicted RBP7.75□□□□□ -1.17
TOP2A-202ENST00000577541 CD163Q86VB7 1156 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 OCSTAMPQ9BR26 566 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
TOP2A-202ENST00000577541 PDXDC2PQ6P474 469 aa7.74□□□□□ -1.17
TOP2A-202ENST00000577541 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
TOP2A-202ENST00000577541 LIMD1Q9UGP4 676 aa7.74□□□□□ -1.17
TOP2A-202ENST00000577541 DYRK1BQ9Y463 629 aa7.74□□□□□ -1.17
TOP2A-202ENST00000577541 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
TOP2A-202ENST00000577541 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
TOP2A-202ENST00000577541 AMHR2Q16671 573 aa7.73□□□□□ -1.17
TOP2A-202ENST00000577541 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
TOP2A-202ENST00000577541 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
TOP2A-202ENST00000577541 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
TOP2A-202ENST00000577541 SCO2A0A1W2PP80 73 aa7.72□□□□□ -1.17
TOP2A-202ENST00000577541 DOC2BQ14184 412 aa7.72□□□□□ -1.17
TOP2A-202ENST00000577541 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
TOP2A-202ENST00000577541 LINC00114Q6XXX2 140 aa7.72□□□□□ -1.17
TOP2A-202ENST00000577541 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
TOP2A-202ENST00000577541 GAS2L1Q99501 681 aaPredicted RBP7.72□□□□□ -1.17
TOP2A-202ENST00000577541 PIK3R2O00459 728 aa7.71□□□□□ -1.18
TOP2A-202ENST00000577541 LILRB3O75022 631 aa7.71□□□□□ -1.18
TOP2A-202ENST00000577541 FOXD4L6Q3SYB3 417 aaPredicted RBP7.71□□□□□ -1.18
TOP2A-202ENST00000577541 FOXD4L3Q6VB84 417 aaPredicted RBP7.71□□□□□ -1.18
TOP2A-202ENST00000577541 HELBQ8NG08 1087 aaPredicted RBP7.71□□□□□ -1.18
TOP2A-202ENST00000577541 KDM2AQ9Y2K7 1162 aa7.71□□□□□ -1.18
TOP2A-202ENST00000577541 CHRNA4P43681 627 aa7.7□□□□□ -1.18
TOP2A-202ENST00000577541 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
TOP2A-202ENST00000577541 THBS1P07996 1170 aa7.69□□□□□ -1.18
TOP2A-202ENST00000577541 KLRG1Q96E93 195 aa7.69□□□□□ -1.18
TOP2A-202ENST00000577541 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
TOP2A-202ENST00000577541 ERVH48-1M5A8F1 160 aa7.68□□□□□ -1.18
TOP2A-202ENST00000577541 GNB5O14775 395 aa7.68□□□□□ -1.18
TOP2A-202ENST00000577541 RAB15P59190 212 aa7.68□□□□□ -1.18
TOP2A-202ENST00000577541 AMPD1P23109 780 aa7.67□□□□□ -1.18
TOP2A-202ENST00000577541 GPC1P35052 558 aa7.67□□□□□ -1.18
TOP2A-202ENST00000577541 NBPF20Q3BBV1 942 aa7.67□□□□□ -1.18
TOP2A-202ENST00000577541 CFHR5Q9BXR6 569 aa7.67□□□□□ -1.18
TOP2A-202ENST00000577541 NUCKS1Q9H1E3 243 aaKnown RBP7.67□□□□□ -1.18
TOP2A-202ENST00000577541 POU4F2Q12837 409 aa7.66□□□□□ -1.18
TOP2A-202ENST00000577541 ARTNQ5T4W7 220 aa7.66□□□□□ -1.18
TOP2A-202ENST00000577541 ZFP64Q9NPA5 681 aa7.66□□□□□ -1.18
TOP2A-202ENST00000577541 FKBPLQ9UIM3 349 aa7.66□□□□□ -1.18
TOP2A-202ENST00000577541 CTDSPL2Q05D32 466 aa7.65□□□□□ -1.18
TOP2A-202ENST00000577541 PARP9Q8IXQ6 854 aa7.65□□□□□ -1.18
TOP2A-202ENST00000577541 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
TOP2A-202ENST00000577541 GOLGA2P5Q9HBQ8 144 aa7.65□□□□□ -1.18
TOP2A-202ENST00000577541 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
TOP2A-202ENST00000577541 TUSC1Q2TAM9 212 aa7.64□□□□□ -1.19
TOP2A-202ENST00000577541 MYSM1Q5VVJ2 828 aa7.64□□□□□ -1.19
TOP2A-202ENST00000577541 MEN1O00255 615 aa7.63□□□□□ -1.19
TOP2A-202ENST00000577541 PTK2Q05397 1052 aa7.63□□□□□ -1.19
TOP2A-202ENST00000577541 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
TOP2A-202ENST00000577541 F11P03951 625 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 GATA4P43694 442 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
TOP2A-202ENST00000577541 NBPF15Q8N660 670 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 ADAM32Q8TC27 787 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 LRRN4Q8WUT4 740 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 PHF24Q9UPV7 400 aa7.62□□□□□ -1.19
TOP2A-202ENST00000577541 ZC3H4Q9UPT8 1303 aaKnown RBP7.61□□□□□ -1.19
TOP2A-202ENST00000577541 ATP5J2-PTCD1G3V325 749 aa7.61□□□□□ -1.19
TOP2A-202ENST00000577541 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
TOP2A-202ENST00000577541 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
TOP2A-202ENST00000577541 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
TOP2A-202ENST00000577541 RSPO4Q2I0M5 234 aaPredicted RBP7.6□□□□□ -1.19
TOP2A-202ENST00000577541 WDR44Q5JSH3 913 aa7.6□□□□□ -1.19
TOP2A-202ENST00000577541 BTBD6Q96KE9 485 aa7.6□□□□□ -1.19
TOP2A-202ENST00000577541 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
TOP2A-202ENST00000577541 GPSM3Q9Y4H4 160 aa7.6□□□□□ -1.19
TOP2A-202ENST00000577541 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
TOP2A-202ENST00000577541 ESPNB1AK53 854 aa7.59□□□□□ -1.19
TOP2A-202ENST00000577541 C2CD2LO14523 706 aa7.59□□□□□ -1.19
TOP2A-202ENST00000577541 NR6A1Q15406 480 aa7.59□□□□□ -1.19
TOP2A-202ENST00000577541 SLCO4C1Q6ZQN7 724 aa7.59□□□□□ -1.19
TOP2A-202ENST00000577541 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
TOP2A-202ENST00000577541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.58□□□□□ -1.2
TOP2A-202ENST00000577541 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
TOP2A-202ENST00000577541 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
TOP2A-202ENST00000577541 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
TOP2A-202ENST00000577541 ZMYND10O75800 440 aa7.57□□□□□ -1.2
TOP2A-202ENST00000577541 DGKGP49619 791 aa7.57□□□□□ -1.2
TOP2A-202ENST00000577541 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
TOP2A-202ENST00000577541 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
TOP2A-202ENST00000577541 DZIP3Q86Y13 1208 aaKnown RBP7.57□□□□□ -1.2
TOP2A-202ENST00000577541 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
TOP2A-202ENST00000577541 EPXP11678 715 aa7.56□□□□□ -1.2
TOP2A-202ENST00000577541 BMP4P12644 408 aa7.56□□□□□ -1.2
TOP2A-202ENST00000577541 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms