RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 KIAA1551Q9HCM1 1747 aa9.11□□□□□ -0.95
SNX11-204ENST00000577310 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
SNX11-204ENST00000577310 HMGB2P26583 209 aaKnown RBP9.1□□□□□ -0.95
SNX11-204ENST00000577310 KCNQ4P56696 695 aa9.1□□□□□ -0.95
SNX11-204ENST00000577310 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
SNX11-204ENST00000577310 CUL9Q8IWT3 2517 aa9.1□□□□□ -0.95
SNX11-204ENST00000577310 POLR3AO14802 1390 aaPredicted RBP9.1□□□□□ -0.95
SNX11-204ENST00000577310 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
SNX11-204ENST00000577310 HSPA8P11142 646 aaKnown RBP9.09□□□□□ -0.95
SNX11-204ENST00000577310 VEGFAP15692 232 aaPredicted RBP9.09□□□□□ -0.95
SNX11-204ENST00000577310 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
SNX11-204ENST00000577310 TAF1LQ8IZX4 1826 aa9.09□□□□□ -0.95
SNX11-204ENST00000577310 CNTNAP1P78357 1384 aa9.09□□□□□ -0.95
SNX11-204ENST00000577310 PPIP5K1Q6PFW1 1433 aa9.08□□□□□ -0.96
SNX11-204ENST00000577310 ZBTB7CA1YPR0 619 aa9.08□□□□□ -0.96
SNX11-204ENST00000577310 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
SNX11-204ENST00000577310 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
SNX11-204ENST00000577310 ACEP12821 1306 aa9.07□□□□□ -0.96
SNX11-204ENST00000577310 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
SNX11-204ENST00000577310 C5P01031 1676 aa9.07□□□□□ -0.96
SNX11-204ENST00000577310 TGFB2P61812 414 aa9.07□□□□□ -0.96
SNX11-204ENST00000577310 APLP2Q06481 763 aa9.07□□□□□ -0.96
SNX11-204ENST00000577310 SLIT3O75094 1523 aa9.06□□□□□ -0.96
SNX11-204ENST00000577310 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
SNX11-204ENST00000577310 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
SNX11-204ENST00000577310 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
SNX11-204ENST00000577310 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
SNX11-204ENST00000577310 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
SNX11-204ENST00000577310 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
SNX11-204ENST00000577310 CCDC88AQ3V6T2 1871 aa9.05□□□□□ -0.96
SNX11-204ENST00000577310 UBR3Q6ZT12 1888 aa9.05□□□□□ -0.96
SNX11-204ENST00000577310 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
SNX11-204ENST00000577310 CFAP70Q5T0N1 1121 aa9.05□□□□□ -0.96
SNX11-204ENST00000577310 FCHSD2O94868 740 aa9.04□□□□□ -0.96
SNX11-204ENST00000577310 VEGFBP49765 207 aa9.04□□□□□ -0.96
SNX11-204ENST00000577310 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
SNX11-204ENST00000577310 CASP8AP2Q9UKL3 1982 aa9.03□□□□□ -0.96
SNX11-204ENST00000577310 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
SNX11-204ENST00000577310 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
SNX11-204ENST00000577310 CCDC61Q9Y6R9 512 aa9.03□□□□□ -0.96
SNX11-204ENST00000577310 CPSF1Q10570 1443 aaKnown RBP9.03□□□□□ -0.96
SNX11-204ENST00000577310 DOT1LQ8TEK3 1739 aa9.02□□□□□ -0.96
SNX11-204ENST00000577310 A0A0G2JLW4 131 aa9.02□□□□□ -0.97
SNX11-204ENST00000577310 GLTPD2A6NH11 291 aa9.02□□□□□ -0.97
SNX11-204ENST00000577310 IL2RBP14784 551 aa9.02□□□□□ -0.97
SNX11-204ENST00000577310 NLRP6P59044 892 aa9.02□□□□□ -0.97
SNX11-204ENST00000577310 ARHGEF25Q86VW2 580 aa9.02□□□□□ -0.97
SNX11-204ENST00000577310 ANKRD36BQ8N2N9 1353 aa9.01□□□□□ -0.97
SNX11-204ENST00000577310 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
SNX11-204ENST00000577310 TRAK1Q9UPV9 953 aa9.01□□□□□ -0.97
SNX11-204ENST00000577310 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
SNX11-204ENST00000577310 SYTL4Q96C24 671 aaPredicted RBP9□□□□□ -0.97
SNX11-204ENST00000577310 C4BP0C0L5 1744 aa9□□□□□ -0.97
SNX11-204ENST00000577310 NSD2O96028 1365 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 SZT2Q5T011 3432 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 ADGRB1O14514 1584 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 DLL1O00548 723 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 DCAF5Q96JK2 942 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 ERBB3P21860 1342 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 USP47Q96K76 1375 aa8.99□□□□□ -0.97
SNX11-204ENST00000577310 NSD3Q9BZ95 1437 aa8.98□□□□□ -0.97
SNX11-204ENST00000577310 DPEP1P16444 411 aa8.98□□□□□ -0.97
SNX11-204ENST00000577310 KCNH5Q8NCM2 988 aa8.98□□□□□ -0.97
SNX11-204ENST00000577310 CDK19Q9BWU1 502 aa8.98□□□□□ -0.97
SNX11-204ENST00000577310 MCOLN1Q9GZU1 580 aa8.98□□□□□ -0.97
SNX11-204ENST00000577310 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
SNX11-204ENST00000577310 POTECB2RU33 542 aa8.97□□□□□ -0.97
SNX11-204ENST00000577310 DDX54Q8TDD1 881 aaKnown RBP8.97□□□□□ -0.97
SNX11-204ENST00000577310 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
SNX11-204ENST00000577310 PASKQ96RG2 1323 aa8.97□□□□□ -0.97
SNX11-204ENST00000577310 DICER1Q9UPY3 1922 aaKnown RBP8.97□□□□□ -0.97
SNX11-204ENST00000577310 TIAM2Q8IVF5 1701 aa8.97□□□□□ -0.97
SNX11-204ENST00000577310 COL6A3P12111 3177 aa8.96□□□□□ -0.97
SNX11-204ENST00000577310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
SNX11-204ENST00000577310 TMEM88BA6NKF7 163 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 MMP10P09238 476 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 KCNA3P22001 575 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
SNX11-204ENST00000577310 SMIM5Q71RC9 77 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 AK7Q96M32 723 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 BEGAINQ9BUH8 593 aa8.96□□□□□ -0.98
SNX11-204ENST00000577310 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.98
SNX11-204ENST00000577310 MKI67P46013 3256 aaKnown RBP8.95□□□□□ -0.98
SNX11-204ENST00000577310 RASSF10A6NK89 507 aa8.95□□□□□ -0.98
SNX11-204ENST00000577310 SSFA2P28290 1259 aa8.95□□□□□ -0.98
SNX11-204ENST00000577310 DEFB115Q30KQ5 88 aa8.95□□□□□ -0.98
SNX11-204ENST00000577310 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
SNX11-204ENST00000577310 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
SNX11-204ENST00000577310 LMNB1P20700 586 aa8.94□□□□□ -0.98
SNX11-204ENST00000577310 HABP4Q5JVS0 413 aaKnown RBP8.94□□□□□ -0.98
SNX11-204ENST00000577310 AMIGO3Q86WK7 504 aa8.94□□□□□ -0.98
SNX11-204ENST00000577310 CCDC87Q9NVE4 849 aa8.94□□□□□ -0.98
SNX11-204ENST00000577310 WDR33Q9C0J8 1336 aaKnown RBP8.94□□□□□ -0.98
SNX11-204ENST00000577310 C4AP0C0L4 1744 aa8.94□□□□□ -0.98
SNX11-204ENST00000577310 PHF14O94880 888 aa8.93□□□□□ -0.98
SNX11-204ENST00000577310 ITGAEP38570 1179 aa8.93□□□□□ -0.98
SNX11-204ENST00000577310 DPY19L2Q6NUT2 758 aa8.93□□□□□ -0.98
SNX11-204ENST00000577310 SCN4AP35499 1836 aa8.92□□□□□ -0.98
SNX11-204ENST00000577310 NFAT5O94916 1531 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms