RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
ERCC4-204ENST00000573018 ESPNB1AK53 854 aa8.38□□□□□ -1.07
ERCC4-204ENST00000573018 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
ERCC4-204ENST00000573018 RIPOR1Q6ZS17 1223 aa8.38□□□□□ -1.07
ERCC4-204ENST00000573018 ENAMQ9NRM1 1142 aa8.38□□□□□ -1.07
ERCC4-204ENST00000573018 USP17L8P0C7I0 530 aa8.37□□□□□ -1.07
ERCC4-204ENST00000573018 RNF144AP50876 292 aaPredicted RBP8.37□□□□□ -1.07
ERCC4-204ENST00000573018 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
ERCC4-204ENST00000573018 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
ERCC4-204ENST00000573018 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
ERCC4-204ENST00000573018 IGF1RP08069 1367 aa8.36□□□□□ -1.07
ERCC4-204ENST00000573018 MEN1O00255 615 aa8.36□□□□□ -1.07
ERCC4-204ENST00000573018 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
ERCC4-204ENST00000573018 FAM117AQ9C073 453 aa8.36□□□□□ -1.07
ERCC4-204ENST00000573018 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
ERCC4-204ENST00000573018 DBN1Q16643 649 aa8.35□□□□□ -1.07
ERCC4-204ENST00000573018 PLA2G4EQ3MJ16 856 aa8.35□□□□□ -1.07
ERCC4-204ENST00000573018 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
ERCC4-204ENST00000573018 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.07
ERCC4-204ENST00000573018 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
ERCC4-204ENST00000573018 DCAF5Q96JK2 942 aa8.34□□□□□ -1.07
ERCC4-204ENST00000573018 GAS2L1Q99501 681 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-204ENST00000573018 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
ERCC4-204ENST00000573018 MSTNO14793 375 aa8.33□□□□□ -1.08
ERCC4-204ENST00000573018 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
ERCC4-204ENST00000573018 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
ERCC4-204ENST00000573018 ITGB2P05107 769 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 BCRP11274 1271 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 POU4F2Q12837 409 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 PODNQ7Z5L7 613 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 SEPT12Q8IYM1 358 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 ACDQ96AP0 544 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 GMCL1Q96IK5 515 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 SPOCK3Q9BQ16 436 aa8.32□□□□□ -1.08
ERCC4-204ENST00000573018 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
ERCC4-204ENST00000573018 BEND7Q8N7W2 519 aaPredicted RBP8.31□□□□□ -1.08
ERCC4-204ENST00000573018 DDRGK1Q96HY6 314 aa8.31□□□□□ -1.08
ERCC4-204ENST00000573018 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
ERCC4-204ENST00000573018 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
ERCC4-204ENST00000573018 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
ERCC4-204ENST00000573018 ADAM23O75077 832 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 GPC1P35052 558 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 RFC5P40937 340 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 TRERF1Q96PN7 1200 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
ERCC4-204ENST00000573018 H7C1W4 665 aa8.28□□□□□ -1.08
ERCC4-204ENST00000573018 MX2P20592 715 aa8.28□□□□□ -1.08
ERCC4-204ENST00000573018 XP32Q5T750 250 aa8.28□□□□□ -1.08
ERCC4-204ENST00000573018 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
ERCC4-204ENST00000573018 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
ERCC4-204ENST00000573018 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
ERCC4-204ENST00000573018 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
ERCC4-204ENST00000573018 ZBBXA8MT70 800 aa8.26□□□□□ -1.09
ERCC4-204ENST00000573018 PROCP04070 461 aa8.26□□□□□ -1.09
ERCC4-204ENST00000573018 FBXO45P0C2W1 286 aa8.26□□□□□ -1.09
ERCC4-204ENST00000573018 ERVK-9P63128 1117 aa8.26□□□□□ -1.09
ERCC4-204ENST00000573018 TRIM52Q96A61 297 aa8.26□□□□□ -1.09
ERCC4-204ENST00000573018 SCTRP47872 440 aa8.25□□□□□ -1.09
ERCC4-204ENST00000573018 NUCKS1Q9H1E3 243 aaKnown RBP8.25□□□□□ -1.09
ERCC4-204ENST00000573018 GRIP2Q9C0E4 1043 aa8.24□□□□□ -1.09
ERCC4-204ENST00000573018 ARHGEF10LQ9HCE6 1279 aa8.24□□□□□ -1.09
ERCC4-204ENST00000573018 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
ERCC4-204ENST00000573018 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
ERCC4-204ENST00000573018 OIP5O43482 229 aa8.23□□□□□ -1.09
ERCC4-204ENST00000573018 SNRPNP63162 240 aaKnown RBP8.23□□□□□ -1.09
ERCC4-204ENST00000573018 CLN3Q13286 438 aa8.23□□□□□ -1.09
ERCC4-204ENST00000573018 CYP2U1Q7Z449 544 aa8.23□□□□□ -1.09
ERCC4-204ENST00000573018 RAB6BQ9NRW1 208 aa8.23□□□□□ -1.09
ERCC4-204ENST00000573018 PCDHB11Q9Y5F2 797 aa8.23□□□□□ -1.09
ERCC4-204ENST00000573018 WASLO00401 505 aaPredicted RBP8.22□□□□□ -1.09
ERCC4-204ENST00000573018 TAS1R3Q7RTX0 852 aa8.22□□□□□ -1.09
ERCC4-204ENST00000573018 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
ERCC4-204ENST00000573018 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
ERCC4-204ENST00000573018 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
ERCC4-204ENST00000573018 SHISA8B8ZZ34 492 aa8.21□□□□□ -1.1
ERCC4-204ENST00000573018 F11P03951 625 aa8.21□□□□□ -1.1
ERCC4-204ENST00000573018 THBS1P07996 1170 aa8.21□□□□□ -1.1
ERCC4-204ENST00000573018 OSBPL3Q9H4L5 887 aa8.21□□□□□ -1.1
ERCC4-204ENST00000573018 KRBA1A5PL33 1030 aa8.2□□□□□ -1.1
ERCC4-204ENST00000573018 PHKA2P46019 1235 aa8.2□□□□□ -1.1
ERCC4-204ENST00000573018 MAP2K3P46734 347 aa8.2□□□□□ -1.1
ERCC4-204ENST00000573018 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
ERCC4-204ENST00000573018 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
ERCC4-204ENST00000573018 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
ERCC4-204ENST00000573018 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
ERCC4-204ENST00000573018 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
ERCC4-204ENST00000573018 RRAGCQ9HB90 399 aa8.19□□□□□ -1.1
ERCC4-204ENST00000573018 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
ERCC4-204ENST00000573018 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
ERCC4-204ENST00000573018 KLRG1Q96E93 195 aa8.18□□□□□ -1.1
ERCC4-204ENST00000573018 TRAK2O60296 914 aa8.17□□□□□ -1.1
ERCC4-204ENST00000573018 BAG6P46379 1132 aa8.17□□□□□ -1.1
ERCC4-204ENST00000573018 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
ERCC4-204ENST00000573018 CCDC125Q86Z20 511 aa8.17□□□□□ -1.1
ERCC4-204ENST00000573018 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
ERCC4-204ENST00000573018 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
ERCC4-204ENST00000573018 IL2RAP01589 272 aa8.16□□□□□ -1.1
ERCC4-204ENST00000573018 COL8A1P27658 744 aa8.16□□□□□ -1.1
ERCC4-204ENST00000573018 CNKSR1Q969H4 720 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms