RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 TATP17735 454 aaPredicted RBP29.56■■■□□ 2.32
RAB40B-207ENST00000572603 DDB1Q16531 1140 aa29.56■■■□□ 2.32
RAB40B-207ENST00000572603 NUDCQ9Y266 331 aa29.56■■■□□ 2.32
RAB40B-207ENST00000572603 KRT27Q7Z3Y8 459 aa29.52■■■□□ 2.32
RAB40B-207ENST00000572603 RSPH6AQ9H0K4 717 aa29.52■■■□□ 2.32
RAB40B-207ENST00000572603 SBF2Q86WG5 1849 aa29.52■■■□□ 2.32
RAB40B-207ENST00000572603 U2AF1L5P0DN76 240 aaPredicted RBP29.51■■■□□ 2.31
RAB40B-207ENST00000572603 U2AF1Q01081 240 aaKnown RBP eCLIP29.51■■■□□ 2.31
RAB40B-207ENST00000572603 EP400Q96L91 3159 aa29.51■■■□□ 2.31
RAB40B-207ENST00000572603 EXOC5O00471 708 aa29.5■■■□□ 2.31
RAB40B-207ENST00000572603 MARCH10Q8NA82 808 aaPredicted RBP29.49■■■□□ 2.31
RAB40B-207ENST00000572603 ZCRB1Q8TBF4 217 aaKnown RBP29.49■■■□□ 2.31
RAB40B-207ENST00000572603 TOGARAM1Q9Y4F4 1720 aa29.48■■■□□ 2.31
RAB40B-207ENST00000572603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.48■■■□□ 2.31
RAB40B-207ENST00000572603 DOT1LQ8TEK3 1739 aa29.48■■■□□ 2.31
RAB40B-207ENST00000572603 PDE3BQ13370 1112 aa29.47■■■□□ 2.31
RAB40B-207ENST00000572603 VIRMAQ69YN4 1812 aaKnown RBP29.47■■■□□ 2.31
RAB40B-207ENST00000572603 MRS2Q9HD23 443 aa29.46■■■□□ 2.31
RAB40B-207ENST00000572603 BCL9O00512 1426 aa29.45■■■□□ 2.31
RAB40B-207ENST00000572603 PRKAR2BP31323 418 aa29.45■■■□□ 2.31
RAB40B-207ENST00000572603 FAM182BQ5T319 152 aa29.45■■■□□ 2.31
RAB40B-207ENST00000572603 PCDH11XQ9BZA7 1347 aa29.45■■■□□ 2.3
RAB40B-207ENST00000572603 PCDH11YQ9BZA8 1340 aa29.45■■■□□ 2.3
RAB40B-207ENST00000572603 FCHSD2O94868 740 aa29.44■■■□□ 2.3
RAB40B-207ENST00000572603 CYP27B1O15528 508 aa29.43■■■□□ 2.3
RAB40B-207ENST00000572603 NHSQ6T4R5 1651 aa29.43■■■□□ 2.3
RAB40B-207ENST00000572603 TNS1Q9HBL0 1735 aaKnown RBP29.42■■■□□ 2.3
RAB40B-207ENST00000572603 ADAMTS7Q9UKP4 1686 aa29.42■■■□□ 2.3
RAB40B-207ENST00000572603 SPG7Q9UQ90 795 aa29.42■■■□□ 2.3
RAB40B-207ENST00000572603 DLG5Q8TDM6 1919 aa29.41■■■□□ 2.3
RAB40B-207ENST00000572603 PLEKHO1Q53GL0 409 aaPredicted RBP29.41■■■□□ 2.3
RAB40B-207ENST00000572603 WDR43Q15061 677 aaKnown RBP eCLIP29.4■■■□□ 2.3
RAB40B-207ENST00000572603 AMOTQ4VCS5 1084 aa29.4■■■□□ 2.3
RAB40B-207ENST00000572603 MIER1Q8N108 512 aa29.4■■■□□ 2.3
RAB40B-207ENST00000572603 DDX54Q8TDD1 881 aaKnown RBP29.4■■■□□ 2.3
RAB40B-207ENST00000572603 PNISRQ8TF01 805 aaKnown RBP29.4■■■□□ 2.3
RAB40B-207ENST00000572603 PHACTR3Q96KR7 559 aa29.4■■■□□ 2.3
RAB40B-207ENST00000572603 PLEKHF1Q96S99 279 aa29.4■■■□□ 2.3
RAB40B-207ENST00000572603 SCN11AQ9UI33 1791 aa29.39■■■□□ 2.3
RAB40B-207ENST00000572603 CCER2I3L3R5 266 aa29.38■■■□□ 2.29
RAB40B-207ENST00000572603 ADAMTS8Q9UP79 889 aa29.38■■■□□ 2.29
RAB40B-207ENST00000572603 ITGB4P16144 1822 aa29.38■■■□□ 2.29
RAB40B-207ENST00000572603 PHKG2P15735 406 aa29.37■■■□□ 2.29
RAB40B-207ENST00000572603 MTHFSDQ2M296 383 aaKnown RBP29.37■■■□□ 2.29
RAB40B-207ENST00000572603 ZNF530Q6P9A1 599 aaPredicted RBP29.37■■■□□ 2.29
RAB40B-207ENST00000572603 KDM6AO15550 1401 aaPredicted RBP29.36■■■□□ 2.29
RAB40B-207ENST00000572603 FAM196AQ6ZSG2 479 aa29.35■■■□□ 2.29
RAB40B-207ENST00000572603 NKX1-1Q15270 411 aaPredicted RBP29.34■■■□□ 2.29
RAB40B-207ENST00000572603 IFNL2Q8IZJ0 200 aa29.33■■■□□ 2.29
RAB40B-207ENST00000572603 KAT6BQ8WYB5 2073 aa29.32■■■□□ 2.28
RAB40B-207ENST00000572603 BTAF1O14981 1849 aa29.32■■■□□ 2.28
RAB40B-207ENST00000572603 GAS2L2Q8NHY3 880 aa29.31■■■□□ 2.28
RAB40B-207ENST00000572603 CCDC146Q8IYE0 955 aa29.3■■■□□ 2.28
RAB40B-207ENST00000572603 MAP3K5Q99683 1374 aa29.29■■■□□ 2.28
RAB40B-207ENST00000572603 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
RAB40B-207ENST00000572603 MRC1P22897 1456 aa29.29■■■□□ 2.28
RAB40B-207ENST00000572603 PNNQ9H307 717 aaKnown RBP29.28■■■□□ 2.28
RAB40B-207ENST00000572603 SIPA1L3O60292 1781 aaPredicted RBP29.28■■■□□ 2.28
RAB40B-207ENST00000572603 C1orf141Q5JVX7 400 aa29.27■■■□□ 2.28
RAB40B-207ENST00000572603 MAPK8IP3Q9UPT6 1336 aa29.26■■■□□ 2.27
RAB40B-207ENST00000572603 PTF1AQ7RTS3 328 aa29.26■■■□□ 2.27
RAB40B-207ENST00000572603 RUNDC1Q96C34 613 aa29.26■■■□□ 2.27
RAB40B-207ENST00000572603 ACSBG1Q96GR2 724 aa29.25■■■□□ 2.27
RAB40B-207ENST00000572603 RGPD3A6NKT7 1758 aaPredicted RBP29.24■■■□□ 2.27
RAB40B-207ENST00000572603 RGPD4Q7Z3J3 1758 aa29.24■■■□□ 2.27
RAB40B-207ENST00000572603 HSP90AB1P08238 724 aaKnown RBP29.24■■■□□ 2.27
RAB40B-207ENST00000572603 NFE2L2Q16236 605 aa29.24■■■□□ 2.27
RAB40B-207ENST00000572603 KCNQ2O43526 872 aa29.23■■■□□ 2.27
RAB40B-207ENST00000572603 TRIM37O94972 964 aa29.23■■■□□ 2.27
RAB40B-207ENST00000572603 DCAF5Q96JK2 942 aa29.23■■■□□ 2.27
RAB40B-207ENST00000572603 NEFMP07197 916 aa29.22■■■□□ 2.27
RAB40B-207ENST00000572603 MPRIPQ6WCQ1 1025 aa29.22■■■□□ 2.27
RAB40B-207ENST00000572603 UPF1Q92900 1129 aaKnown RBP eCLIP29.22■■■□□ 2.27
RAB40B-207ENST00000572603 PAPPAQ13219 1627 aa29.21■■■□□ 2.27
RAB40B-207ENST00000572603 GNAT3A8MTJ3 354 aa29.2■■■□□ 2.26
RAB40B-207ENST00000572603 FAM9BQ8IZU0 186 aa29.2■■■□□ 2.26
RAB40B-207ENST00000572603 CEMIPQ8WUJ3 1361 aa29.2■■■□□ 2.26
RAB40B-207ENST00000572603 TMPOP42166 694 aaKnown RBP29.19■■■□□ 2.26
RAB40B-207ENST00000572603 PRIM1P49642 420 aaKnown RBP29.19■■■□□ 2.26
RAB40B-207ENST00000572603 BCL11BQ9C0K0 894 aaPredicted RBP29.19■■■□□ 2.26
RAB40B-207ENST00000572603 RNMTO43148 476 aaKnown RBP29.18■■■□□ 2.26
RAB40B-207ENST00000572603 LGR6Q9HBX8 967 aa29.18■■■□□ 2.26
RAB40B-207ENST00000572603 LY75O60449 1722 aa29.17■■■□□ 2.26
RAB40B-207ENST00000572603 ERVV-2B6SEH9 535 aa29.16■■■□□ 2.26
RAB40B-207ENST00000572603 IL17REQ8NFR9 667 aa29.16■■■□□ 2.26
RAB40B-207ENST00000572603 RRP7AQ9Y3A4 280 aaKnown RBP29.15■■■□□ 2.26
RAB40B-207ENST00000572603 RREB1Q92766 1687 aa29.15■■■□□ 2.26
RAB40B-207ENST00000572603 APAF1O14727 1248 aa29.14■■■□□ 2.26
RAB40B-207ENST00000572603 SYTL4Q96C24 671 aaPredicted RBP29.14■■■□□ 2.26
RAB40B-207ENST00000572603 HTATSF1O43719 755 aaKnown RBP29.13■■■□□ 2.25
RAB40B-207ENST00000572603 UBR2Q8IWV8 1755 aa29.12■■■□□ 2.25
RAB40B-207ENST00000572603 DCTN1Q14203 1278 aa29.12■■■□□ 2.25
RAB40B-207ENST00000572603 MCM10Q7L590 875 aa29.12■■■□□ 2.25
RAB40B-207ENST00000572603 CCDC125Q86Z20 511 aa29.12■■■□□ 2.25
RAB40B-207ENST00000572603 PIGBQ92521 554 aa29.12■■■□□ 2.25
RAB40B-207ENST00000572603 SOCS7O14512 581 aa29.11■■■□□ 2.25
RAB40B-207ENST00000572603 RIPK4P57078 832 aa29.11■■■□□ 2.25
RAB40B-207ENST00000572603 SLC52A2Q9HAB3 445 aa29.11■■■□□ 2.25
RAB40B-207ENST00000572603 TMOD3Q9NYL9 352 aa29.11■■■□□ 2.25
RAB40B-207ENST00000572603 TRIM35Q9UPQ4 493 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms