RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
UBR1-209ENST00000569243 QPCTQ16769 361 aa9.16□□□□□ -0.94
UBR1-209ENST00000569243 KDF1Q8NAX2 398 aaPredicted RBP9.16□□□□□ -0.94
UBR1-209ENST00000569243 ZNF784Q8NCA9 323 aaPredicted RBP9.16□□□□□ -0.94
UBR1-209ENST00000569243 RRAGCQ9HB90 399 aa9.16□□□□□ -0.94
UBR1-209ENST00000569243 NSFL1CQ9UNZ2 370 aaKnown RBP9.16□□□□□ -0.94
UBR1-209ENST00000569243 SHISA8B8ZZ34 492 aa9.15□□□□□ -0.94
UBR1-209ENST00000569243 RAB15P59190 212 aa9.15□□□□□ -0.94
UBR1-209ENST00000569243 ZMYM1Q5SVZ6 1142 aa9.15□□□□□ -0.94
UBR1-209ENST00000569243 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
UBR1-209ENST00000569243 C1QTNF9BB2RNN3 333 aa9.14□□□□□ -0.95
UBR1-209ENST00000569243 ZBTB33Q86T24 672 aa9.14□□□□□ -0.95
UBR1-209ENST00000569243 SEMA6BQ9H3T3 888 aa9.14□□□□□ -0.95
UBR1-209ENST00000569243 H7C1W4 665 aa9.13□□□□□ -0.95
UBR1-209ENST00000569243 AMHR2Q16671 573 aa9.13□□□□□ -0.95
UBR1-209ENST00000569243 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
UBR1-209ENST00000569243 HELBQ8NG08 1087 aaPredicted RBP9.13□□□□□ -0.95
UBR1-209ENST00000569243 GAS2L1Q99501 681 aaPredicted RBP9.13□□□□□ -0.95
UBR1-209ENST00000569243 RNF144AP50876 292 aaPredicted RBP9.12□□□□□ -0.95
UBR1-209ENST00000569243 SUV39H2Q9H5I1 410 aa9.12□□□□□ -0.95
UBR1-209ENST00000569243 LILRA1O75019 489 aa9.11□□□□□ -0.95
UBR1-209ENST00000569243 KRTAP9-9Q9BYP9 154 aa9.11□□□□□ -0.95
UBR1-209ENST00000569243 KRTAP9-4Q9BYQ2 154 aa9.11□□□□□ -0.95
UBR1-209ENST00000569243 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
UBR1-209ENST00000569243 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
UBR1-209ENST00000569243 CD163Q86VB7 1156 aa9.1□□□□□ -0.95
UBR1-209ENST00000569243 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
UBR1-209ENST00000569243 LILRB3O75022 631 aa9.09□□□□□ -0.95
UBR1-209ENST00000569243 MAP2K3P46734 347 aa9.09□□□□□ -0.95
UBR1-209ENST00000569243 BARGINQ6ZT62 677 aa9.09□□□□□ -0.95
UBR1-209ENST00000569243 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
UBR1-209ENST00000569243 ZMYND10O75800 440 aa9.08□□□□□ -0.96
UBR1-209ENST00000569243 DOC2BQ14184 412 aa9.08□□□□□ -0.96
UBR1-209ENST00000569243 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
UBR1-209ENST00000569243 SCO2A0A1W2PP80 73 aa9.07□□□□□ -0.96
UBR1-209ENST00000569243 ERVH48-1M5A8F1 160 aa9.07□□□□□ -0.96
UBR1-209ENST00000569243 CHRNA4P43681 627 aa9.07□□□□□ -0.96
UBR1-209ENST00000569243 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
UBR1-209ENST00000569243 POU4F2Q12837 409 aa9.06□□□□□ -0.96
UBR1-209ENST00000569243 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
UBR1-209ENST00000569243 NBPF20Q3BBV1 942 aa9.05□□□□□ -0.96
UBR1-209ENST00000569243 LINC00114Q6XXX2 140 aa9.05□□□□□ -0.96
UBR1-209ENST00000569243 KLRG1Q96E93 195 aa9.05□□□□□ -0.96
UBR1-209ENST00000569243 OCSTAMPQ9BR26 566 aa9.05□□□□□ -0.96
UBR1-209ENST00000569243 MEN1O00255 615 aa9.04□□□□□ -0.96
UBR1-209ENST00000569243 AMPD1P23109 780 aa9.04□□□□□ -0.96
UBR1-209ENST00000569243 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
UBR1-209ENST00000569243 NUCKS1Q9H1E3 243 aaKnown RBP9.04□□□□□ -0.96
UBR1-209ENST00000569243 CYLDQ9NQC7 956 aa9.04□□□□□ -0.96
UBR1-209ENST00000569243 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
UBR1-209ENST00000569243 PARP9Q8IXQ6 854 aa9.03□□□□□ -0.96
UBR1-209ENST00000569243 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
UBR1-209ENST00000569243 HOXB4P17483 251 aaPredicted RBP9.02□□□□□ -0.97
UBR1-209ENST00000569243 PTK2Q05397 1052 aa9.02□□□□□ -0.97
UBR1-209ENST00000569243 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
UBR1-209ENST00000569243 GDF2Q9UK05 429 aaPredicted RBP9.02□□□□□ -0.97
UBR1-209ENST00000569243 GNB5O14775 395 aa9.01□□□□□ -0.97
UBR1-209ENST00000569243 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
UBR1-209ENST00000569243 KRTAP4-8A0A0G2JLE6 195 aa9□□□□□ -0.97
UBR1-209ENST00000569243 GPC1P35052 558 aa9□□□□□ -0.97
UBR1-209ENST00000569243 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
UBR1-209ENST00000569243 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
UBR1-209ENST00000569243 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
UBR1-209ENST00000569243 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
UBR1-209ENST00000569243 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
UBR1-209ENST00000569243 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
UBR1-209ENST00000569243 PIK3R2O00459 728 aa8.98□□□□□ -0.97
UBR1-209ENST00000569243 NBPF10Q6P3W6 841 aaKnown RBP8.98□□□□□ -0.97
UBR1-209ENST00000569243 NBPF15Q8N660 670 aa8.98□□□□□ -0.97
UBR1-209ENST00000569243 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
UBR1-209ENST00000569243 A0A1W2PRU2 124 aa8.97□□□□□ -0.97
UBR1-209ENST00000569243 F11P03951 625 aa8.97□□□□□ -0.97
UBR1-209ENST00000569243 NR6A1Q15406 480 aa8.97□□□□□ -0.97
UBR1-209ENST00000569243 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
UBR1-209ENST00000569243 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
UBR1-209ENST00000569243 TIMMDC1Q9NPL8 285 aa8.97□□□□□ -0.97
UBR1-209ENST00000569243 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
UBR1-209ENST00000569243 THBS1P07996 1170 aa8.96□□□□□ -0.98
UBR1-209ENST00000569243 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
UBR1-209ENST00000569243 NOP53Q9NZM5 478 aaKnown RBP8.95□□□□□ -0.98
UBR1-209ENST00000569243 PHF24Q9UPV7 400 aa8.95□□□□□ -0.98
UBR1-209ENST00000569243 GPSM3Q9Y4H4 160 aa8.95□□□□□ -0.98
UBR1-209ENST00000569243 ESPNB1AK53 854 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 GATA4P43694 442 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 NLRP3Q96P20 1036 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 GPAMQ9HCL2 828 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 GGA1Q9UJY5 639 aa8.94□□□□□ -0.98
UBR1-209ENST00000569243 ARTNQ5T4W7 220 aa8.93□□□□□ -0.98
UBR1-209ENST00000569243 NBPF11Q86T75 865 aa8.93□□□□□ -0.98
UBR1-209ENST00000569243 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
UBR1-209ENST00000569243 AK7Q96M32 723 aa8.93□□□□□ -0.98
UBR1-209ENST00000569243 BMP4P12644 408 aa8.92□□□□□ -0.98
UBR1-209ENST00000569243 RSPO4Q2I0M5 234 aaPredicted RBP8.92□□□□□ -0.98
UBR1-209ENST00000569243 SLCO4C1Q6ZQN7 724 aa8.92□□□□□ -0.98
UBR1-209ENST00000569243 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
UBR1-209ENST00000569243 DGKGP49619 791 aa8.91□□□□□ -0.98
UBR1-209ENST00000569243 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
UBR1-209ENST00000569243 TAS1R3Q7RTX0 852 aa8.91□□□□□ -0.98
UBR1-209ENST00000569243 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms