RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 MAGI1Q96QZ7 1491 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-214ENST00000568651 FAM69CQ0P6D2 419 aa10.72□□□□□ -0.69
HERPUD1-214ENST00000568651 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
HERPUD1-214ENST00000568651 CDV3Q9UKY7 258 aaKnown RBP10.72□□□□□ -0.69
HERPUD1-214ENST00000568651 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
HERPUD1-214ENST00000568651 SYNJ2O15056 1496 aa10.72□□□□□ -0.69
HERPUD1-214ENST00000568651 SSFA2P28290 1259 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 CCDC27Q2M243 656 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 ZNF511Q8NB15 262 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 C1QTNF2Q9BXJ5 285 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 DOLKQ9UPQ8 538 aa10.71□□□□□ -0.69
HERPUD1-214ENST00000568651 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 SIX5Q8N196 739 aa10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 OGFOD1Q8N543 542 aa10.7□□□□□ -0.7
HERPUD1-214ENST00000568651 POTEMA6NI47 508 aa10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 DNAAF2Q9NVR5 837 aaKnown RBP10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
HERPUD1-214ENST00000568651 ARID4AP29374 1257 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-214ENST00000568651 BAP1Q92560 729 aa10.68□□□□□ -0.7
HERPUD1-214ENST00000568651 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
HERPUD1-214ENST00000568651 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
HERPUD1-214ENST00000568651 CCDC85AQ96PX6 553 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-214ENST00000568651 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 ESPNB1AK53 854 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 CLDN10P78369 228 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 C1orf216Q8TAB5 229 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 CUX1P39880 1505 aa10.67□□□□□ -0.7
HERPUD1-214ENST00000568651 DPYDQ12882 1025 aa10.66□□□□□ -0.7
HERPUD1-214ENST00000568651 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-214ENST00000568651 GIGYF1O75420 1035 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 DKK1O94907 266 aa10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 S1PR4O95977 384 aa10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 AGERQ15109 404 aa10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 FOXJ1Q92949 421 aa10.65□□□□□ -0.7
HERPUD1-214ENST00000568651 ATP2B4P23634 1241 aa10.64□□□□□ -0.71
HERPUD1-214ENST00000568651 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
HERPUD1-214ENST00000568651 PTPN5P54829 565 aa10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 SEC13P55735 322 aa10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 GTF2IP78347 998 aa10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 USP4Q13107 963 aa10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 RBM19Q9Y4C8 960 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-214ENST00000568651 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-214ENST00000568651 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
HERPUD1-214ENST00000568651 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
HERPUD1-214ENST00000568651 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
HERPUD1-214ENST00000568651 MAP4K5Q9Y4K4 846 aa10.61□□□□□ -0.71
HERPUD1-214ENST00000568651 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
HERPUD1-214ENST00000568651 SH3BP2P78314 561 aa10.6□□□□□ -0.71
HERPUD1-214ENST00000568651 PCDHGA11Q9Y5H2 935 aa10.6□□□□□ -0.71
HERPUD1-214ENST00000568651 M0R2N6 131 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 ERCC3P19447 782 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 WNT7BP56706 349 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 CCDC102BQ68D86 513 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
HERPUD1-214ENST00000568651 VARSP26640 1264 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-214ENST00000568651 FOXD4L5Q5VV16 416 aaPredicted RBP10.58□□□□□ -0.72
HERPUD1-214ENST00000568651 FOXD4L4Q8WXT5 416 aaPredicted RBP10.58□□□□□ -0.72
HERPUD1-214ENST00000568651 PCDHB11Q9Y5F2 797 aa10.58□□□□□ -0.72
HERPUD1-214ENST00000568651 ZBTB24O43167 697 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-214ENST00000568651 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-214ENST00000568651 EGFL7Q9UHF1 273 aa10.57□□□□□ -0.72
HERPUD1-214ENST00000568651 SOWAHDA6NJG2 315 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 OCLNQ16625 522 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 TAS1R3Q7RTX0 852 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 ANKLE1Q8NAG6 615 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 CXXC1Q9P0U4 656 aaPredicted RBP10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 NUP160Q12769 1436 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
HERPUD1-214ENST00000568651 ABCA10Q8WWZ4 1543 aa10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 MYCP01106 439 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 GGCXP38435 758 aa10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 TRIM32Q13049 653 aa10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 PRG4Q92954 1404 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-214ENST00000568651 KCNC4Q03721 635 aa10.54□□□□□ -0.72
HERPUD1-214ENST00000568651 PSME1Q06323 249 aa10.54□□□□□ -0.72
HERPUD1-214ENST00000568651 RPIAP49247 311 aa10.53□□□□□ -0.72
HERPUD1-214ENST00000568651 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
HERPUD1-214ENST00000568651 MPNDQ8N594 471 aa10.52□□□□□ -0.73
HERPUD1-214ENST00000568651 ABCC10Q5T3U5 1492 aa10.51□□□□□ -0.73
HERPUD1-214ENST00000568651 SFI1A8K8P3 1242 aa10.51□□□□□ -0.73
HERPUD1-214ENST00000568651 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
HERPUD1-214ENST00000568651 RBM25P49756 843 aaKnown RBP10.51□□□□□ -0.73
HERPUD1-214ENST00000568651 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms