RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 FAM177BA6PVY3 158 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 PDCL2Q8N4E4 241 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 PNISRQ8TF01 805 aaKnown RBP7.46□□□□□ -1.22
CDH13-209ENST00000567109 ZKSCAN1P17029 563 aaPredicted RBP7.46□□□□□ -1.22
CDH13-209ENST00000567109 PPP2R1AP30153 589 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.22
CDH13-209ENST00000567109 UBAP1LF5GYI3 381 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 TTC37Q6PGP7 1564 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 PRDM15P57071 1507 aaPredicted RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 TTC21BQ7Z4L5 1316 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 TATP17735 454 aaPredicted RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 LTKP29376 864 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 KRT28Q7Z3Y7 464 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 CLUAP1Q96AJ1 413 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 DRC1Q96MC2 740 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 DNAI2Q9GZS0 605 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 C11orf95C9JLR9 678 aaPredicted RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 CHMP5Q9NZZ3 219 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 CIZ1Q9ULV3 898 aaPredicted RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 PDE4AP27815 886 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 UBE2Q2Q8WVN8 375 aa7.45□□□□□ -1.22
CDH13-209ENST00000567109 LRRC59Q96AG4 307 aaKnown RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
CDH13-209ENST00000567109 ABCC3O15438 1527 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 KRT18P05783 430 aaKnown RBP7.44□□□□□ -1.22
CDH13-209ENST00000567109 TTLL12Q14166 644 aaPredicted RBP7.44□□□□□ -1.22
CDH13-209ENST00000567109 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 CHMP4BP1P59074 171 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 GNAI1P63096 354 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
CDH13-209ENST00000567109 NEUROD6Q96NK8 337 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
CDH13-209ENST00000567109 ANKRD18AQ8IVF6 992 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 CAGE1Q8TC20 777 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
CDH13-209ENST00000567109 ANKRD62A6NC57 917 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 PIK3C2GO75747 1445 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
CDH13-209ENST00000567109 NUCB2P80303 420 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 BICD2Q8TD16 824 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 ZCCHC11Q5TAX3 1644 aaKnown RBP7.43□□□□□ -1.22
CDH13-209ENST00000567109 ADCY10Q96PN6 1610 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 OLFM4Q6UX06 510 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 C16orf71Q8IYS4 520 aaPredicted RBP7.43□□□□□ -1.22
CDH13-209ENST00000567109 ACEP12821 1306 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 TMEM94Q12767 1356 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 TXLNAP40222 546 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 TEX35Q5T0J7 233 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 FAM135BQ49AJ0 1406 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 TBC1D2BQ9UPU7 963 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 ERC1Q8IUD2 1116 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 EFCAB6Q5THR3 1501 aa7.43□□□□□ -1.22
CDH13-209ENST00000567109 MAGEC2Q9UBF1 373 aaPredicted RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 PLA2R1Q13018 1463 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 ELL2O00472 640 aaPredicted RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 MCM5P33992 734 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 DCTN1Q14203 1278 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 SKIDA1Q1XH10 827 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 PDCL3Q9H2J4 239 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 LMTK3Q96Q04 1460 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 ZMYM4Q5VZL5 1548 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 E9PSI1 815 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 CA8P35219 290 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 NOM1Q5C9Z4 860 aaKnown RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 FCHSD2O94868 740 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 SASS6Q6UVJ0 657 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
CDH13-209ENST00000567109 NPC1L1Q9UHC9 1359 aa7.42□□□□□ -1.22
CDH13-209ENST00000567109 KDM4AO75164 1064 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 MAP3K9P80192 1104 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 TESK2Q96S53 571 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 PLXNC1O60486 1568 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 HECW2Q9P2P5 1572 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 RRP7AQ9Y3A4 280 aaKnown RBP7.41□□□□□ -1.22
CDH13-209ENST00000567109 MBD3O95983 291 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 CT47B1P0C2W7 299 aaPredicted RBP7.41□□□□□ -1.22
CDH13-209ENST00000567109 RRP1P56182 461 aaKnown RBP7.41□□□□□ -1.22
CDH13-209ENST00000567109 PKNOX2Q96KN3 472 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 RBM42Q9BTD8 480 aaKnown RBP7.41□□□□□ -1.22
CDH13-209ENST00000567109 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 CNNM1Q9NRU3 951 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 KDM6BO15054 1643 aa7.41□□□□□ -1.22
CDH13-209ENST00000567109 GBP2P32456 591 aaPredicted RBP7.4□□□□□ -1.22
CDH13-209ENST00000567109 NME9Q86XW9 330 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 LETM1O95202 739 aaPredicted RBP7.4□□□□□ -1.22
CDH13-209ENST00000567109 MCM2P49736 904 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 ZHX3Q9H4I2 956 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 ARHGEF10O15013 1369 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 TTLL5Q6EMB2 1281 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 ERC2O15083 957 aa7.4□□□□□ -1.22
CDH13-209ENST00000567109 CWC15Q9P013 229 aaKnown RBP7.4□□□□□ -1.22
CDH13-209ENST00000567109 ARHGEF40Q8TER5 1519 aa7.4□□□□□ -1.23
CDH13-209ENST00000567109 FOXO3O43524 673 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms