RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
NR4A1-221ENST00000565848 KDRP35968 1356 aa16.64■□□□□ 0.26
NR4A1-221ENST00000565848 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
NR4A1-221ENST00000565848 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
NR4A1-221ENST00000565848 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
NR4A1-221ENST00000565848 EYA1Q99502 592 aa16.61■□□□□ 0.25
NR4A1-221ENST00000565848 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
NR4A1-221ENST00000565848 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
NR4A1-221ENST00000565848 EVA1CP58658 441 aa16.6■□□□□ 0.25
NR4A1-221ENST00000565848 PLEKHG2Q9H7P9 1386 aa16.6■□□□□ 0.25
NR4A1-221ENST00000565848 NBPF6Q5VWK0 638 aa16.59■□□□□ 0.25
NR4A1-221ENST00000565848 NBPF4Q96M43 638 aa16.59■□□□□ 0.25
NR4A1-221ENST00000565848 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
NR4A1-221ENST00000565848 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
NR4A1-221ENST00000565848 CRB1P82279 1406 aa16.59■□□□□ 0.25
NR4A1-221ENST00000565848 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.24
NR4A1-221ENST00000565848 KCNQ2O43526 872 aa16.58■□□□□ 0.24
NR4A1-221ENST00000565848 SPATA31A1Q5TZJ5 1347 aa16.58■□□□□ 0.24
NR4A1-221ENST00000565848 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
NR4A1-221ENST00000565848 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
NR4A1-221ENST00000565848 RSPH6AQ9H0K4 717 aa16.57■□□□□ 0.24
NR4A1-221ENST00000565848 FCHSD2O94868 740 aa16.56■□□□□ 0.24
NR4A1-221ENST00000565848 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
NR4A1-221ENST00000565848 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
NR4A1-221ENST00000565848 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
NR4A1-221ENST00000565848 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
NR4A1-221ENST00000565848 WDR43Q15061 677 aaKnown RBP eCLIP16.54■□□□□ 0.24
NR4A1-221ENST00000565848 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
NR4A1-221ENST00000565848 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
NR4A1-221ENST00000565848 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
NR4A1-221ENST00000565848 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
NR4A1-221ENST00000565848 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
NR4A1-221ENST00000565848 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
NR4A1-221ENST00000565848 MEGF6O75095 1541 aa16.52■□□□□ 0.24
NR4A1-221ENST00000565848 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
NR4A1-221ENST00000565848 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
NR4A1-221ENST00000565848 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
NR4A1-221ENST00000565848 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
NR4A1-221ENST00000565848 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
NR4A1-221ENST00000565848 HMOX1P09601 288 aa16.5■□□□□ 0.23
NR4A1-221ENST00000565848 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
NR4A1-221ENST00000565848 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
NR4A1-221ENST00000565848 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
NR4A1-221ENST00000565848 CSB-PGBD3P0DP91 1061 aa16.49■□□□□ 0.23
NR4A1-221ENST00000565848 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
NR4A1-221ENST00000565848 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
NR4A1-221ENST00000565848 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
NR4A1-221ENST00000565848 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
NR4A1-221ENST00000565848 ADAMTS7Q9UKP4 1686 aa16.49■□□□□ 0.23
NR4A1-221ENST00000565848 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
NR4A1-221ENST00000565848 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
NR4A1-221ENST00000565848 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
NR4A1-221ENST00000565848 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
NR4A1-221ENST00000565848 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
NR4A1-221ENST00000565848 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
NR4A1-221ENST00000565848 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
NR4A1-221ENST00000565848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
NR4A1-221ENST00000565848 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
NR4A1-221ENST00000565848 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
NR4A1-221ENST00000565848 PDGFDQ9GZP0 370 aaPredicted RBP16.46■□□□□ 0.23
NR4A1-221ENST00000565848 IL2RBP14784 551 aa16.44■□□□□ 0.22
NR4A1-221ENST00000565848 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
NR4A1-221ENST00000565848 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
NR4A1-221ENST00000565848 CDCA7Q9BWT1 371 aaPredicted RBP16.43■□□□□ 0.22
NR4A1-221ENST00000565848 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
NR4A1-221ENST00000565848 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
NR4A1-221ENST00000565848 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
NR4A1-221ENST00000565848 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
NR4A1-221ENST00000565848 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
NR4A1-221ENST00000565848 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
NR4A1-221ENST00000565848 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
NR4A1-221ENST00000565848 APAF1O14727 1248 aa16.41■□□□□ 0.22
NR4A1-221ENST00000565848 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
NR4A1-221ENST00000565848 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
NR4A1-221ENST00000565848 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
NR4A1-221ENST00000565848 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
NR4A1-221ENST00000565848 ZNF521Q96K83 1311 aa16.41■□□□□ 0.22
NR4A1-221ENST00000565848 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
NR4A1-221ENST00000565848 PTF1AQ7RTS3 328 aa16.4■□□□□ 0.22
NR4A1-221ENST00000565848 SCN11AQ9UI33 1791 aa16.4■□□□□ 0.22
NR4A1-221ENST00000565848 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
NR4A1-221ENST00000565848 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
NR4A1-221ENST00000565848 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
NR4A1-221ENST00000565848 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
NR4A1-221ENST00000565848 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
NR4A1-221ENST00000565848 PLSCR1O15162 318 aa16.38■□□□□ 0.21
NR4A1-221ENST00000565848 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
NR4A1-221ENST00000565848 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
NR4A1-221ENST00000565848 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
NR4A1-221ENST00000565848 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 CYP27B1O15528 508 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
NR4A1-221ENST00000565848 PTGER2P43116 358 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 DDB1Q16531 1140 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
NR4A1-221ENST00000565848 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
NR4A1-221ENST00000565848 MRC1P22897 1456 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms