RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 ADH1AP07327 375 aa7.9□□□□□ -1.14
RBFOX1-216ENST00000564850 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
RBFOX1-216ENST00000564850 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
RBFOX1-216ENST00000564850 CDV3Q9UKY7 258 aaKnown RBP7.89□□□□□ -1.15
RBFOX1-216ENST00000564850 MINK1Q8N4C8 1332 aaPredicted RBP7.88□□□□□ -1.15
RBFOX1-216ENST00000564850 PER1O15534 1290 aaPredicted RBP7.88□□□□□ -1.15
RBFOX1-216ENST00000564850 YBX3P16989 372 aaKnown RBP eCLIP7.88□□□□□ -1.15
RBFOX1-216ENST00000564850 TSHZ2Q9NRE2 1034 aa7.88□□□□□ -1.15
RBFOX1-216ENST00000564850 DYRK1BQ9Y463 629 aa7.88□□□□□ -1.15
RBFOX1-216ENST00000564850 HOXB4P17483 251 aaPredicted RBP7.87□□□□□ -1.15
RBFOX1-216ENST00000564850 PTGIRP43119 386 aa7.87□□□□□ -1.15
RBFOX1-216ENST00000564850 GOLGA6L1Q8N7Z2 621 aa7.87□□□□□ -1.15
RBFOX1-216ENST00000564850 CCDC102AQ96A19 550 aa7.87□□□□□ -1.15
RBFOX1-216ENST00000564850 KLRG1Q96E93 195 aa7.87□□□□□ -1.15
RBFOX1-216ENST00000564850 INTS6LQ5JSJ4 861 aaKnown RBP7.86□□□□□ -1.15
RBFOX1-216ENST00000564850 NKAPLQ5M9Q1 402 aa7.86□□□□□ -1.15
RBFOX1-216ENST00000564850 DYRK3O43781 588 aa7.85□□□□□ -1.15
RBFOX1-216ENST00000564850 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
RBFOX1-216ENST00000564850 LRP8Q14114 963 aa7.85□□□□□ -1.15
RBFOX1-216ENST00000564850 KRTAP4-9Q9BYQ8 210 aa7.85□□□□□ -1.15
RBFOX1-216ENST00000564850 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
RBFOX1-216ENST00000564850 SSTR3P32745 418 aaPredicted RBP7.84□□□□□ -1.15
RBFOX1-216ENST00000564850 GJA5P36382 358 aa7.84□□□□□ -1.15
RBFOX1-216ENST00000564850 TSC1Q92574 1164 aa7.84□□□□□ -1.15
RBFOX1-216ENST00000564850 GPKOWQ92917 476 aaPredicted RBP eCLIP7.84□□□□□ -1.15
RBFOX1-216ENST00000564850 NUCKS1Q9H1E3 243 aaKnown RBP7.84□□□□□ -1.15
RBFOX1-216ENST00000564850 HRCP23327 699 aa7.83□□□□□ -1.16
RBFOX1-216ENST00000564850 ZNF784Q8NCA9 323 aaPredicted RBP7.83□□□□□ -1.16
RBFOX1-216ENST00000564850 KDM2AQ9Y2K7 1162 aa7.83□□□□□ -1.16
RBFOX1-216ENST00000564850 TXKP42681 527 aa7.82□□□□□ -1.16
RBFOX1-216ENST00000564850 PRSS36Q5K4E3 855 aa7.82□□□□□ -1.16
RBFOX1-216ENST00000564850 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
RBFOX1-216ENST00000564850 CFHR5Q9BXR6 569 aa7.82□□□□□ -1.16
RBFOX1-216ENST00000564850 TMPRSS4Q9NRS4 437 aa7.82□□□□□ -1.16
RBFOX1-216ENST00000564850 DGKGP49619 791 aa7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 RSBN1LQ6PCB5 846 aaPredicted RBP7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 SLCO4C1Q6ZQN7 724 aa7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
RBFOX1-216ENST00000564850 ARID1BQ8NFD5 2236 aaPredicted RBP7.8□□□□□ -1.16
RBFOX1-216ENST00000564850 PAX4O43316 350 aa7.8□□□□□ -1.16
RBFOX1-216ENST00000564850 TPSG1Q9NRR2 321 aa7.8□□□□□ -1.16
RBFOX1-216ENST00000564850 PHF24Q9UPV7 400 aa7.8□□□□□ -1.16
RBFOX1-216ENST00000564850 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
RBFOX1-216ENST00000564850 BTBD6Q96KE9 485 aa7.79□□□□□ -1.16
RBFOX1-216ENST00000564850 HYAL3O43820 417 aaPredicted RBP7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 GPC1P35052 558 aa7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 RAB15P59190 212 aa7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 POU4F2Q12837 409 aa7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 KRTAP4-2Q9BYR5 136 aa7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 GGA1Q9UJY5 639 aa7.77□□□□□ -1.17
RBFOX1-216ENST00000564850 LILRA1O75019 489 aa7.76□□□□□ -1.17
RBFOX1-216ENST00000564850 SPATA31C1P0DKV0 1188 aa7.76□□□□□ -1.17
RBFOX1-216ENST00000564850 BMP4P12644 408 aa7.76□□□□□ -1.17
RBFOX1-216ENST00000564850 ZBTB33Q86T24 672 aa7.76□□□□□ -1.17
RBFOX1-216ENST00000564850 CABLES1Q8TDN4 633 aa7.76□□□□□ -1.17
RBFOX1-216ENST00000564850 MEN1O00255 615 aa7.75□□□□□ -1.17
RBFOX1-216ENST00000564850 TBC1D2Q9BYX2 928 aa7.75□□□□□ -1.17
RBFOX1-216ENST00000564850 F11P03951 625 aa7.74□□□□□ -1.17
RBFOX1-216ENST00000564850 EPXP11678 715 aa7.74□□□□□ -1.17
RBFOX1-216ENST00000564850 DIXDC1Q155Q3 683 aa7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 NBPF10Q6P3W6 841 aaKnown RBP7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 PDXDC2PQ6P474 469 aa7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 NBPF15Q8N660 670 aa7.73□□□□□ -1.17
RBFOX1-216ENST00000564850 CSPP1Q1MSJ5 1256 aa7.72□□□□□ -1.17
RBFOX1-216ENST00000564850 TIMMDC1Q9NPL8 285 aa7.72□□□□□ -1.17
RBFOX1-216ENST00000564850 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.18
RBFOX1-216ENST00000564850 FZD5Q13467 585 aa7.71□□□□□ -1.18
RBFOX1-216ENST00000564850 RIC3Q7Z5B4 369 aa7.71□□□□□ -1.18
RBFOX1-216ENST00000564850 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
RBFOX1-216ENST00000564850 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
RBFOX1-216ENST00000564850 THBS1P07996 1170 aa7.7□□□□□ -1.18
RBFOX1-216ENST00000564850 CHSY3Q70JA7 882 aa7.7□□□□□ -1.18
RBFOX1-216ENST00000564850 HELBQ8NG08 1087 aaPredicted RBP7.7□□□□□ -1.18
RBFOX1-216ENST00000564850 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
RBFOX1-216ENST00000564850 TTLL12Q14166 644 aaPredicted RBP7.69□□□□□ -1.18
RBFOX1-216ENST00000564850 PLVAPQ9BX97 442 aa7.69□□□□□ -1.18
RBFOX1-216ENST00000564850 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
RBFOX1-216ENST00000564850 NUTM2BA6NNL0 878 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 NUTM2EB1AL46 878 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 APBA3O96018 575 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 NUTM2DQ5VT03 806 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 NUTM2AQ8IVF1 878 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 TRIM52Q96A61 297 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 GPAMQ9HCL2 828 aa7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 ATXN7L1Q9ULK2 861 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 COL17A1Q9UMD9 1497 aaPredicted RBP7.68□□□□□ -1.18
RBFOX1-216ENST00000564850 C2CD2LO14523 706 aa7.67□□□□□ -1.18
RBFOX1-216ENST00000564850 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
RBFOX1-216ENST00000564850 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
RBFOX1-216ENST00000564850 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
RBFOX1-216ENST00000564850 FGFR3P22607 806 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms