RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 IP6K1Q92551 441 aa20.75■□□□□ 0.91
SCAMP2-205ENST00000564529 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
SCAMP2-205ENST00000564529 MTFR1LQ9H019 292 aa20.74■□□□□ 0.91
SCAMP2-205ENST00000564529 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
SCAMP2-205ENST00000564529 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
SCAMP2-205ENST00000564529 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
SCAMP2-205ENST00000564529 TNS2Q63HR2 1409 aa20.71■□□□□ 0.91
SCAMP2-205ENST00000564529 ACSBG1Q96GR2 724 aa20.71■□□□□ 0.91
SCAMP2-205ENST00000564529 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
SCAMP2-205ENST00000564529 HOXC9P31274 260 aa20.7■□□□□ 0.9
SCAMP2-205ENST00000564529 RALBP1Q15311 655 aa20.7■□□□□ 0.9
SCAMP2-205ENST00000564529 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
SCAMP2-205ENST00000564529 INSRP06213 1382 aa20.69■□□□□ 0.9
SCAMP2-205ENST00000564529 AMPHP49418 695 aa20.68■□□□□ 0.9
SCAMP2-205ENST00000564529 FLT4P35916 1363 aa20.68■□□□□ 0.9
SCAMP2-205ENST00000564529 TNNT2P45379 298 aaPredicted RBP20.67■□□□□ 0.9
SCAMP2-205ENST00000564529 ARXQ96QS3 562 aa20.67■□□□□ 0.9
SCAMP2-205ENST00000564529 NLRP2Q9NX02 1062 aa20.67■□□□□ 0.9
SCAMP2-205ENST00000564529 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
SCAMP2-205ENST00000564529 PRKRIP1Q9H875 184 aaPredicted RBP20.66■□□□□ 0.9
SCAMP2-205ENST00000564529 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
SCAMP2-205ENST00000564529 ERBB3P21860 1342 aa20.65■□□□□ 0.9
SCAMP2-205ENST00000564529 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
SCAMP2-205ENST00000564529 MTHFSP49914 203 aa20.65■□□□□ 0.9
SCAMP2-205ENST00000564529 IL2RBP14784 551 aa20.64■□□□□ 0.89
SCAMP2-205ENST00000564529 ZNF827Q17R98 1081 aa20.64■□□□□ 0.89
SCAMP2-205ENST00000564529 HSP90AB2PQ58FF8 381 aa20.64■□□□□ 0.89
SCAMP2-205ENST00000564529 LTN1O94822 1766 aa20.64■□□□□ 0.89
SCAMP2-205ENST00000564529 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
SCAMP2-205ENST00000564529 LRRC4BQ9NT99 713 aa20.63■□□□□ 0.89
SCAMP2-205ENST00000564529 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
SCAMP2-205ENST00000564529 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
SCAMP2-205ENST00000564529 CHD4Q14839 1912 aa20.61■□□□□ 0.89
SCAMP2-205ENST00000564529 BTAF1O14981 1849 aa20.6■□□□□ 0.89
SCAMP2-205ENST00000564529 SENP3-EIF4A1A0A087X0R7 540 aa20.59■□□□□ 0.89
SCAMP2-205ENST00000564529 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
SCAMP2-205ENST00000564529 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
SCAMP2-205ENST00000564529 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.89
SCAMP2-205ENST00000564529 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.89
SCAMP2-205ENST00000564529 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
SCAMP2-205ENST00000564529 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
SCAMP2-205ENST00000564529 IL13P35225 146 aa20.57■□□□□ 0.88
SCAMP2-205ENST00000564529 GPR162Q16538 588 aa20.57■□□□□ 0.88
SCAMP2-205ENST00000564529 EIF4A2Q14240 407 aaKnown RBP20.56■□□□□ 0.88
SCAMP2-205ENST00000564529 NCAPD2Q15021 1401 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 ANP32CO43423 234 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 NBPF6Q5VWK0 638 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 NBPF4Q96M43 638 aa20.54■□□□□ 0.88
SCAMP2-205ENST00000564529 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
SCAMP2-205ENST00000564529 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
SCAMP2-205ENST00000564529 EYA1Q99502 592 aa20.53■□□□□ 0.88
SCAMP2-205ENST00000564529 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
SCAMP2-205ENST00000564529 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
SCAMP2-205ENST00000564529 DIAPH1O60610 1272 aaKnown RBP20.52■□□□□ 0.88
SCAMP2-205ENST00000564529 KCNQ4P56696 695 aa20.52■□□□□ 0.88
SCAMP2-205ENST00000564529 CFAP53Q96M91 514 aa20.52■□□□□ 0.88
SCAMP2-205ENST00000564529 POLD1P28340 1107 aa20.51■□□□□ 0.87
SCAMP2-205ENST00000564529 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
SCAMP2-205ENST00000564529 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
SCAMP2-205ENST00000564529 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
SCAMP2-205ENST00000564529 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-205ENST00000564529 FAM208AQ9UK61 1670 aaKnown RBP20.49■□□□□ 0.87
SCAMP2-205ENST00000564529 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
SCAMP2-205ENST00000564529 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
SCAMP2-205ENST00000564529 NLGN2Q8NFZ4 835 aa20.48■□□□□ 0.87
SCAMP2-205ENST00000564529 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
SCAMP2-205ENST00000564529 QSER1Q2KHR3 1735 aa20.47■□□□□ 0.87
SCAMP2-205ENST00000564529 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
SCAMP2-205ENST00000564529 PLEKHG2Q9H7P9 1386 aa20.46■□□□□ 0.87
SCAMP2-205ENST00000564529 GIGYF1O75420 1035 aaPredicted RBP20.46■□□□□ 0.87
SCAMP2-205ENST00000564529 KDRP35968 1356 aa20.46■□□□□ 0.87
SCAMP2-205ENST00000564529 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
SCAMP2-205ENST00000564529 TUBGCP6Q96RT7 1819 aa20.44■□□□□ 0.86
SCAMP2-205ENST00000564529 ZCRB1Q8TBF4 217 aaKnown RBP20.42■□□□□ 0.86
SCAMP2-205ENST00000564529 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
SCAMP2-205ENST00000564529 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■□□□□ 9.4
SCAMP2-205ENST00000564529 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
SCAMP2-205ENST00000564529 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
SCAMP2-205ENST00000564529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
SCAMP2-205ENST00000564529 DOT1LQ8TEK3 1739 aa20.41■□□□□ 0.86
SCAMP2-205ENST00000564529 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
SCAMP2-205ENST00000564529 MSH5O43196 834 aa20.4■□□□□ 0.86
SCAMP2-205ENST00000564529 LY75O60449 1722 aa20.4■□□□□ 0.86
SCAMP2-205ENST00000564529 COL23A1Q86Y22 540 aaPredicted RBP20.4■□□□□ 0.86
SCAMP2-205ENST00000564529 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.86
SCAMP2-205ENST00000564529 FCHSD2O94868 740 aa20.39■□□□□ 0.85
SCAMP2-205ENST00000564529 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
SCAMP2-205ENST00000564529 MEGF6O75095 1541 aa20.38■□□□□ 0.85
SCAMP2-205ENST00000564529 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
SCAMP2-205ENST00000564529 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
SCAMP2-205ENST00000564529 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
SCAMP2-205ENST00000564529 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
SCAMP2-205ENST00000564529 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
SCAMP2-205ENST00000564529 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
SCAMP2-205ENST00000564529 CEP350Q5VT06 3117 aa20.36■□□□□ 0.85
SCAMP2-205ENST00000564529 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
SCAMP2-205ENST00000564529 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms