RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 RUNDC1Q96C34 613 aa24.44■■□□□ 1.5
VAC14-205ENST00000564512 IL2RBP14784 551 aa24.42■■□□□ 1.5
VAC14-205ENST00000564512 RAPGEF4Q8WZA2 1011 aa24.42■■□□□ 1.5
VAC14-205ENST00000564512 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
VAC14-205ENST00000564512 CDCA7Q9BWT1 371 aaPredicted RBP24.42■■□□□ 1.5
VAC14-205ENST00000564512 TATP17735 454 aaPredicted RBP24.41■■□□□ 1.5
VAC14-205ENST00000564512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.41■■□□□ 1.5
VAC14-205ENST00000564512 CCDC146Q8IYE0 955 aa24.4■■□□□ 1.5
VAC14-205ENST00000564512 USP35Q9P2H5 1018 aa24.4■■□□□ 1.5
VAC14-205ENST00000564512 RGS17Q9UGC6 210 aaPredicted RBP24.4■■□□□ 1.5
VAC14-205ENST00000564512 SIPA1L3O60292 1781 aaPredicted RBP24.39■■□□□ 1.5
VAC14-205ENST00000564512 MAPK8IP3Q9UPT6 1336 aa24.39■■□□□ 1.5
VAC14-205ENST00000564512 TOGARAM1Q9Y4F4 1720 aa24.39■■□□□ 1.5
VAC14-205ENST00000564512 PHACTR3Q96KR7 559 aa24.39■■□□□ 1.49
VAC14-205ENST00000564512 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
VAC14-205ENST00000564512 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
VAC14-205ENST00000564512 AMOTQ4VCS5 1084 aa24.37■■□□□ 1.49
VAC14-205ENST00000564512 ONECUT3O60422 494 aaPredicted RBP24.36■■□□□ 1.49
VAC14-205ENST00000564512 NCBP3Q53F19 620 aaKnown RBP24.36■■□□□ 1.49
VAC14-205ENST00000564512 DOT1LQ8TEK3 1739 aa24.35■■□□□ 1.49
VAC14-205ENST00000564512 NEFMP07197 916 aa24.35■■□□□ 1.49
VAC14-205ENST00000564512 GAS2L2Q8NHY3 880 aa24.35■■□□□ 1.49
VAC14-205ENST00000564512 NFE2L2Q16236 605 aa24.34■■□□□ 1.49
VAC14-205ENST00000564512 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
VAC14-205ENST00000564512 PLEKHO1Q53GL0 409 aaPredicted RBP24.34■■□□□ 1.49
VAC14-205ENST00000564512 ITGB4P16144 1822 aa24.33■■□□□ 1.49
VAC14-205ENST00000564512 RBM6P78332 1123 aaKnown RBP24.33■■□□□ 1.49
VAC14-205ENST00000564512 FAM98CQ17RN3 349 aaKnown RBP24.33■■□□□ 1.49
VAC14-205ENST00000564512 SBF2Q86WG5 1849 aa24.33■■□□□ 1.48
VAC14-205ENST00000564512 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.48
VAC14-205ENST00000564512 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.48
VAC14-205ENST00000564512 MAP3K5Q99683 1374 aa24.32■■□□□ 1.48
VAC14-205ENST00000564512 APAF1O14727 1248 aa24.32■■□□□ 1.48
VAC14-205ENST00000564512 TMPOP42166 694 aaKnown RBP24.32■■□□□ 1.48
VAC14-205ENST00000564512 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
VAC14-205ENST00000564512 SPG7Q9UQ90 795 aa24.32■■□□□ 1.48
VAC14-205ENST00000564512 MRC1P22897 1456 aa24.32■■□□□ 1.48
VAC14-205ENST00000564512 NGEFQ8N5V2 710 aa24.31■■□□□ 1.48
VAC14-205ENST00000564512 ZCRB1Q8TBF4 217 aaKnown RBP24.31■■□□□ 1.48
VAC14-205ENST00000564512 RGS12O14924 1447 aa24.3■■□□□ 1.48
VAC14-205ENST00000564512 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
VAC14-205ENST00000564512 KDM6AO15550 1401 aaPredicted RBP24.28■■□□□ 1.48
VAC14-205ENST00000564512 CCDC27Q2M243 656 aa24.28■■□□□ 1.48
VAC14-205ENST00000564512 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
VAC14-205ENST00000564512 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 CYP27B1O15528 508 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 PHKG2P15735 406 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 DDB1Q16531 1140 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
VAC14-205ENST00000564512 KDM3BQ7LBC6 1761 aa24.26■■□□□ 1.47
VAC14-205ENST00000564512 CEMIPQ8WUJ3 1361 aa24.26■■□□□ 1.47
VAC14-205ENST00000564512 BCL9O00512 1426 aa24.26■■□□□ 1.47
VAC14-205ENST00000564512 EXOC5O00471 708 aa24.25■■□□□ 1.47
VAC14-205ENST00000564512 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
VAC14-205ENST00000564512 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
VAC14-205ENST00000564512 ZNF521Q96K83 1311 aa24.25■■□□□ 1.47
VAC14-205ENST00000564512 RXRBP28702 533 aa24.24■■□□□ 1.47
VAC14-205ENST00000564512 RIPK4P57078 832 aa24.24■■□□□ 1.47
VAC14-205ENST00000564512 LMOD3Q0VAK6 560 aa24.24■■□□□ 1.47
VAC14-205ENST00000564512 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
VAC14-205ENST00000564512 TRIM35Q9UPQ4 493 aa24.24■■□□□ 1.47
VAC14-205ENST00000564512 RRP7AQ9Y3A4 280 aaKnown RBP24.24■■□□□ 1.47
VAC14-205ENST00000564512 GNAT3A8MTJ3 354 aa24.23■■□□□ 1.47
VAC14-205ENST00000564512 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
VAC14-205ENST00000564512 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
VAC14-205ENST00000564512 ZBED9Q6R2W3 1325 aa24.22■■□□□ 1.47
VAC14-205ENST00000564512 SEPT12Q8IYM1 358 aa24.22■■□□□ 1.47
VAC14-205ENST00000564512 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
VAC14-205ENST00000564512 HSP90AB1P08238 724 aaKnown RBP24.2■■□□□ 1.46
VAC14-205ENST00000564512 NEUROD2Q15784 382 aa24.19■■□□□ 1.46
VAC14-205ENST00000564512 MARCH10Q8NA82 808 aaPredicted RBP24.19■■□□□ 1.46
VAC14-205ENST00000564512 WWC1Q8IX03 1113 aa24.18■■□□□ 1.46
VAC14-205ENST00000564512 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
VAC14-205ENST00000564512 A0A0G2JS52 829 aa24.17■■□□□ 1.46
VAC14-205ENST00000564512 MYT1Q01538 1121 aa24.17■■□□□ 1.46
VAC14-205ENST00000564512 DDX54Q8TDD1 881 aaKnown RBP24.17■■□□□ 1.46
VAC14-205ENST00000564512 BTAF1O14981 1849 aa24.17■■□□□ 1.46
VAC14-205ENST00000564512 RNMTO43148 476 aaKnown RBP24.16■■□□□ 1.46
VAC14-205ENST00000564512 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
VAC14-205ENST00000564512 RTF1Q92541 710 aaKnown RBP24.16■■□□□ 1.46
VAC14-205ENST00000564512 SENP3-EIF4A1A0A087X0R7 540 aa24.15■■□□□ 1.46
VAC14-205ENST00000564512 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
VAC14-205ENST00000564512 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
VAC14-205ENST00000564512 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
VAC14-205ENST00000564512 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
VAC14-205ENST00000564512 MCM10Q7L590 875 aa24.14■■□□□ 1.45
VAC14-205ENST00000564512 IL16Q14005 1332 aa24.13■■□□□ 1.45
VAC14-205ENST00000564512 DCTN1Q14203 1278 aa24.13■■□□□ 1.45
VAC14-205ENST00000564512 WDR63Q8IWG1 891 aa24.13■■□□□ 1.45
VAC14-205ENST00000564512 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
VAC14-205ENST00000564512 LGR6Q9HBX8 967 aa24.12■■□□□ 1.45
VAC14-205ENST00000564512 ERVV-2B6SEH9 535 aa24.11■■□□□ 1.45
VAC14-205ENST00000564512 CALD1Q05682 793 aaKnown RBP24.11■■□□□ 1.45
VAC14-205ENST00000564512 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
VAC14-205ENST00000564512 THUMPD2Q9BTF0 503 aaKnown RBP24.11■■□□□ 1.45
VAC14-205ENST00000564512 SALL2Q9Y467 1007 aaPredicted RBP24.11■■□□□ 1.45
VAC14-205ENST00000564512 ZNF831Q5JPB2 1677 aa24.1■■□□□ 1.45
VAC14-205ENST00000564512 LY75O60449 1722 aa24.1■■□□□ 1.45
VAC14-205ENST00000564512 RGPD3A6NKT7 1758 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms