RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
AP4E1-206ENST00000561397 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
AP4E1-206ENST00000561397 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
AP4E1-206ENST00000561397 RNF20Q5VTR2 975 aa9.21□□□□□ -0.94
AP4E1-206ENST00000561397 EMILIN1Q9Y6C2 1016 aa9.21□□□□□ -0.94
AP4E1-206ENST00000561397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
AP4E1-206ENST00000561397 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 LZTS3O60299 673 aaPredicted RBP9.2□□□□□ -0.94
AP4E1-206ENST00000561397 SCARF1Q14162 830 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 PBXIP1Q96AQ6 731 aa9.2□□□□□ -0.94
AP4E1-206ENST00000561397 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
AP4E1-206ENST00000561397 RFX1P22670 979 aa9.19□□□□□ -0.94
AP4E1-206ENST00000561397 CBLBQ13191 982 aa9.18□□□□□ -0.94
AP4E1-206ENST00000561397 NCOA4Q13772 614 aa9.18□□□□□ -0.94
AP4E1-206ENST00000561397 C6orf118Q5T5N4 469 aa9.18□□□□□ -0.94
AP4E1-206ENST00000561397 Q6ZVU0 165 aa9.18□□□□□ -0.94
AP4E1-206ENST00000561397 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
AP4E1-206ENST00000561397 CDCA7Q9BWT1 371 aaPredicted RBP9.18□□□□□ -0.94
AP4E1-206ENST00000561397 ERVH48-1M5A8F1 160 aa9.17□□□□□ -0.94
AP4E1-206ENST00000561397 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
AP4E1-206ENST00000561397 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
AP4E1-206ENST00000561397 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
AP4E1-206ENST00000561397 BMP2P12643 396 aa9.15□□□□□ -0.94
AP4E1-206ENST00000561397 TMPRSS4Q9NRS4 437 aa9.15□□□□□ -0.94
AP4E1-206ENST00000561397 SOS2Q07890 1332 aaPredicted RBP9.14□□□□□ -0.95
AP4E1-206ENST00000561397 ATG7O95352 703 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 VEGFBP49765 207 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 HOMEZQ8IX15 550 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
AP4E1-206ENST00000561397 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
AP4E1-206ENST00000561397 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
AP4E1-206ENST00000561397 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
AP4E1-206ENST00000561397 EML3Q32P44 896 aa9.13□□□□□ -0.95
AP4E1-206ENST00000561397 WIPF1O43516 503 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 LILRA1O75019 489 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 DKK1O94907 266 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 UPP2O95045 317 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 ADD1P35611 737 aaKnown RBP9.12□□□□□ -0.95
AP4E1-206ENST00000561397 SCTRP47872 440 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 RAB15P59190 212 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
AP4E1-206ENST00000561397 NPAS3Q8IXF0 933 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
AP4E1-206ENST00000561397 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
AP4E1-206ENST00000561397 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 ATP5J2-PTCD1G3V325 749 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 H3BM21 787 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 CLDN10P78369 228 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
AP4E1-206ENST00000561397 CDCA8Q53HL2 280 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 OXLD1Q5BKU9 147 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 KDF1Q8NAX2 398 aaPredicted RBP9.11□□□□□ -0.95
AP4E1-206ENST00000561397 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
AP4E1-206ENST00000561397 ZBTB7BO15156 539 aaPredicted RBP9.1□□□□□ -0.95
AP4E1-206ENST00000561397 SPINT1O43278 529 aa9.1□□□□□ -0.95
AP4E1-206ENST00000561397 USP4Q13107 963 aa9.1□□□□□ -0.95
AP4E1-206ENST00000561397 PTK7Q13308 1070 aa9.1□□□□□ -0.95
AP4E1-206ENST00000561397 NOD1Q9Y239 953 aa9.1□□□□□ -0.95
AP4E1-206ENST00000561397 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 MAN1A2O60476 641 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 RETREG2Q8NC44 543 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 OSBPL3Q9H4L5 887 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 ZMIZ1Q9ULJ6 1067 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
AP4E1-206ENST00000561397 USP17L15C9J2P7 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L13C9JLJ4 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L12C9JPN9 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L11C9JVI0 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L21D6R901 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L18D6R9N7 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L22D6RA61 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L17D6RBQ6 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L19D6RCP7 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L20D6RJB6 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 USP17L24Q0WX57 530 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 TRIM50Q86XT4 487 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
AP4E1-206ENST00000561397 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
AP4E1-206ENST00000561397 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 GTF2IP78347 998 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
AP4E1-206ENST00000561397 RELBQ01201 579 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 SIX5Q8N196 739 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
AP4E1-206ENST00000561397 TMEM88BA6NKF7 163 aa9.06□□□□□ -0.96
AP4E1-206ENST00000561397 RASA1P20936 1047 aa9.06□□□□□ -0.96
AP4E1-206ENST00000561397 GMPRP36959 345 aa9.06□□□□□ -0.96
AP4E1-206ENST00000561397 CTSOP43234 321 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms