RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
SHF-209ENST00000561091 BRWD3Q6RI45 1802 aa21.22■□□□□ 0.99
SHF-209ENST00000561091 OVOS2A0A0G2JMS6 1433 aa21.22■□□□□ 0.99
SHF-209ENST00000561091 RBM6P78332 1123 aaKnown RBP21.22■□□□□ 0.99
SHF-209ENST00000561091 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
SHF-209ENST00000561091 A0A0G2JS52 829 aa21.2■□□□□ 0.98
SHF-209ENST00000561091 RXRBP28702 533 aa21.2■□□□□ 0.98
SHF-209ENST00000561091 MYT1Q01538 1121 aa21.2■□□□□ 0.98
SHF-209ENST00000561091 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
SHF-209ENST00000561091 PLEKHF1Q96S99 279 aa21.2■□□□□ 0.98
SHF-209ENST00000561091 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
SHF-209ENST00000561091 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
SHF-209ENST00000561091 ONECUT3O60422 494 aaPredicted RBP21.17■□□□□ 0.98
SHF-209ENST00000561091 TNS2Q63HR2 1409 aa21.17■□□□□ 0.98
SHF-209ENST00000561091 VIRMAQ69YN4 1812 aaKnown RBP21.16■□□□□ 0.98
SHF-209ENST00000561091 SEPT12Q8IYM1 358 aa21.16■□□□□ 0.98
SHF-209ENST00000561091 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
SHF-209ENST00000561091 RUNDC1Q96C34 613 aa21.16■□□□□ 0.98
SHF-209ENST00000561091 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
SHF-209ENST00000561091 RGS12O14924 1447 aa21.15■□□□□ 0.98
SHF-209ENST00000561091 MAPK8IP3Q9UPT6 1336 aa21.15■□□□□ 0.98
SHF-209ENST00000561091 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
SHF-209ENST00000561091 PLEKHO1Q53GL0 409 aaPredicted RBP21.15■□□□□ 0.98
SHF-209ENST00000561091 EXOC5O00471 708 aa21.14■□□□□ 0.97
SHF-209ENST00000561091 DDB1Q16531 1140 aa21.14■□□□□ 0.97
SHF-209ENST00000561091 MTHFSDQ2M296 383 aaKnown RBP21.14■□□□□ 0.97
SHF-209ENST00000561091 SPG7Q9UQ90 795 aa21.14■□□□□ 0.97
SHF-209ENST00000561091 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
SHF-209ENST00000561091 NEFMP07197 916 aa21.13■□□□□ 0.97
SHF-209ENST00000561091 AMOTQ4VCS5 1084 aa21.12■□□□□ 0.97
SHF-209ENST00000561091 ZNF530Q6P9A1 599 aaPredicted RBP21.12■□□□□ 0.97
SHF-209ENST00000561091 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
SHF-209ENST00000561091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
SHF-209ENST00000561091 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
SHF-209ENST00000561091 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
SHF-209ENST00000561091 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
SHF-209ENST00000561091 APAF1O14727 1248 aa21.1■□□□□ 0.97
SHF-209ENST00000561091 CYP27B1O15528 508 aa21.1■□□□□ 0.97
SHF-209ENST00000561091 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
SHF-209ENST00000561091 GAS2L2Q8NHY3 880 aa21.09■□□□□ 0.97
SHF-209ENST00000561091 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
SHF-209ENST00000561091 PHKG2P15735 406 aa21.08■□□□□ 0.97
SHF-209ENST00000561091 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
SHF-209ENST00000561091 PDE3BQ13370 1112 aa21.08■□□□□ 0.97
SHF-209ENST00000561091 MARCH10Q8NA82 808 aaPredicted RBP21.08■□□□□ 0.97
SHF-209ENST00000561091 TOGARAM1Q9Y4F4 1720 aa21.08■□□□□ 0.97
SHF-209ENST00000561091 DOT1LQ8TEK3 1739 aa21.07■□□□□ 0.96
SHF-209ENST00000561091 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
SHF-209ENST00000561091 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
SHF-209ENST00000561091 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
SHF-209ENST00000561091 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
SHF-209ENST00000561091 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
SHF-209ENST00000561091 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
SHF-209ENST00000561091 KRT27Q7Z3Y8 459 aa21.05■□□□□ 0.96
SHF-209ENST00000561091 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
SHF-209ENST00000561091 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
SHF-209ENST00000561091 RIPK4P57078 832 aa21.04■□□□□ 0.96
SHF-209ENST00000561091 ITGB4P16144 1822 aa21.04■□□□□ 0.96
SHF-209ENST00000561091 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
SHF-209ENST00000561091 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
SHF-209ENST00000561091 SALL2Q9Y467 1007 aaPredicted RBP21.03■□□□□ 0.96
SHF-209ENST00000561091 KDM6AO15550 1401 aaPredicted RBP21.03■□□□□ 0.96
SHF-209ENST00000561091 KAT6BQ8WYB5 2073 aa21.02■□□□□ 0.96
SHF-209ENST00000561091 DCTN1Q14203 1278 aa21.01■□□□□ 0.95
SHF-209ENST00000561091 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
SHF-209ENST00000561091 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
SHF-209ENST00000561091 MCM10Q7L590 875 aa21■□□□□ 0.95
SHF-209ENST00000561091 TRIM35Q9UPQ4 493 aa21■□□□□ 0.95
SHF-209ENST00000561091 SIPA1L3O60292 1781 aaPredicted RBP21■□□□□ 0.95
SHF-209ENST00000561091 RNMTO43148 476 aaKnown RBP20.99■□□□□ 0.95
SHF-209ENST00000561091 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
SHF-209ENST00000561091 IL17REQ8NFR9 667 aa20.99■□□□□ 0.95
SHF-209ENST00000561091 THUMPD2Q9BTF0 503 aaKnown RBP20.99■□□□□ 0.95
SHF-209ENST00000561091 RTF1Q92541 710 aaKnown RBP20.98■□□□□ 0.95
SHF-209ENST00000561091 DCAF5Q96JK2 942 aa20.98■□□□□ 0.95
SHF-209ENST00000561091 NHSQ6T4R5 1651 aa20.98■□□□□ 0.95
SHF-209ENST00000561091 HTATSF1O43719 755 aaKnown RBP20.97■□□□□ 0.95
SHF-209ENST00000561091 HNRNPUQ00839 825 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHF-209ENST00000561091 ACSBG1Q96GR2 724 aa20.97■□□□□ 0.95
SHF-209ENST00000561091 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
SHF-209ENST00000561091 MRC1P22897 1456 aa20.95■□□□□ 0.94
SHF-209ENST00000561091 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
SHF-209ENST00000561091 BCL9O00512 1426 aa20.95■□□□□ 0.94
SHF-209ENST00000561091 FAM196AQ6ZSG2 479 aa20.94■□□□□ 0.94
SHF-209ENST00000561091 BTAF1O14981 1849 aa20.93■□□□□ 0.94
SHF-209ENST00000561091 PRIM1P49642 420 aaKnown RBP20.93■□□□□ 0.94
SHF-209ENST00000561091 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
SHF-209ENST00000561091 WWC1Q8IX03 1113 aa20.93■□□□□ 0.94
SHF-209ENST00000561091 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
SHF-209ENST00000561091 KCNQ2O43526 872 aa20.92■□□□□ 0.94
SHF-209ENST00000561091 CABP4P57796 275 aa20.92■□□□□ 0.94
SHF-209ENST00000561091 PTF1AQ7RTS3 328 aa20.92■□□□□ 0.94
SHF-209ENST00000561091 SYTL4Q96C24 671 aaPredicted RBP20.92■□□□□ 0.94
SHF-209ENST00000561091 ERVV-2B6SEH9 535 aa20.91■□□□□ 0.94
SHF-209ENST00000561091 TEFQ10587 303 aa20.91■□□□□ 0.94
SHF-209ENST00000561091 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
SHF-209ENST00000561091 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
SHF-209ENST00000561091 SLC52A2Q9HAB3 445 aa20.91■□□□□ 0.94
SHF-209ENST00000561091 TNS1Q9HBL0 1735 aaKnown RBP20.9■□□□□ 0.94
SHF-209ENST00000561091 NFATC2IPQ8NCF5 419 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms