RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 GDF2Q9UK05 429 aaPredicted RBP9□□□□□ -0.97
AP4E1-204ENST00000561004 DYRK1BQ9Y463 629 aa9□□□□□ -0.97
AP4E1-204ENST00000561004 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
AP4E1-204ENST00000561004 COL8A1P27658 744 aa8.99□□□□□ -0.97
AP4E1-204ENST00000561004 RNF144AP50876 292 aaPredicted RBP8.99□□□□□ -0.97
AP4E1-204ENST00000561004 GRIN2CQ14957 1233 aa8.99□□□□□ -0.97
AP4E1-204ENST00000561004 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
AP4E1-204ENST00000561004 GTPBP3Q969Y2 492 aaKnown RBP8.99□□□□□ -0.97
AP4E1-204ENST00000561004 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
AP4E1-204ENST00000561004 INTS6LQ5JSJ4 861 aaKnown RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 NUTM2DQ5VT03 806 aaPredicted RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
AP4E1-204ENST00000561004 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
AP4E1-204ENST00000561004 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
AP4E1-204ENST00000561004 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
AP4E1-204ENST00000561004 GNB5O14775 395 aa8.95□□□□□ -0.98
AP4E1-204ENST00000561004 GPC1P35052 558 aa8.95□□□□□ -0.98
AP4E1-204ENST00000561004 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
AP4E1-204ENST00000561004 PHF24Q9UPV7 400 aa8.95□□□□□ -0.98
AP4E1-204ENST00000561004 NBPF11Q86T75 865 aa8.94□□□□□ -0.98
AP4E1-204ENST00000561004 EDARADDQ8WWZ3 215 aa8.94□□□□□ -0.98
AP4E1-204ENST00000561004 RHOQP17081 205 aa8.93□□□□□ -0.98
AP4E1-204ENST00000561004 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
AP4E1-204ENST00000561004 CD163Q86VB7 1156 aa8.93□□□□□ -0.98
AP4E1-204ENST00000561004 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
AP4E1-204ENST00000561004 CABLES1Q8TDN4 633 aa8.93□□□□□ -0.98
AP4E1-204ENST00000561004 GAS2L1Q99501 681 aaPredicted RBP8.93□□□□□ -0.98
AP4E1-204ENST00000561004 ZCCHC6Q5VYS8 1495 aaKnown RBP8.93□□□□□ -0.98
AP4E1-204ENST00000561004 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
AP4E1-204ENST00000561004 AMPD1P23109 780 aa8.92□□□□□ -0.98
AP4E1-204ENST00000561004 AMHR2Q16671 573 aa8.92□□□□□ -0.98
AP4E1-204ENST00000561004 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
AP4E1-204ENST00000561004 ZFP64Q9NPA5 681 aa8.92□□□□□ -0.98
AP4E1-204ENST00000561004 SHISA8B8ZZ34 492 aa8.91□□□□□ -0.98
AP4E1-204ENST00000561004 ZNF784Q8NCA9 323 aaPredicted RBP8.91□□□□□ -0.98
AP4E1-204ENST00000561004 NUCKS1Q9H1E3 243 aaKnown RBP8.91□□□□□ -0.98
AP4E1-204ENST00000561004 PTK2Q05397 1052 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 KRTAP9-9Q9BYP9 154 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 KRTAP9-4Q9BYQ2 154 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 GOLGA2P5Q9HBQ8 144 aa8.9□□□□□ -0.98
AP4E1-204ENST00000561004 ITGB7P26010 798 aa8.89□□□□□ -0.99
AP4E1-204ENST00000561004 LINC00114Q6XXX2 140 aa8.89□□□□□ -0.99
AP4E1-204ENST00000561004 GPSM3Q9Y4H4 160 aa8.89□□□□□ -0.99
AP4E1-204ENST00000561004 DOC2BQ14184 412 aa8.88□□□□□ -0.99
AP4E1-204ENST00000561004 ARTNQ5T4W7 220 aa8.88□□□□□ -0.99
AP4E1-204ENST00000561004 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
AP4E1-204ENST00000561004 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
AP4E1-204ENST00000561004 FKBPLQ9UIM3 349 aa8.88□□□□□ -0.99
AP4E1-204ENST00000561004 KRTAP4-8A0A0G2JLE6 195 aa8.87□□□□□ -0.99
AP4E1-204ENST00000561004 LILRA1O75019 489 aa8.87□□□□□ -0.99
AP4E1-204ENST00000561004 GATA4P43694 442 aa8.87□□□□□ -0.99
AP4E1-204ENST00000561004 F11P03951 625 aa8.86□□□□□ -0.99
AP4E1-204ENST00000561004 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
AP4E1-204ENST00000561004 LILRB3O75022 631 aa8.85□□□□□ -0.99
AP4E1-204ENST00000561004 CHRNA4P43681 627 aa8.85□□□□□ -0.99
AP4E1-204ENST00000561004 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
AP4E1-204ENST00000561004 KDF1Q8NAX2 398 aaPredicted RBP8.85□□□□□ -0.99
AP4E1-204ENST00000561004 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
AP4E1-204ENST00000561004 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
AP4E1-204ENST00000561004 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
AP4E1-204ENST00000561004 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
AP4E1-204ENST00000561004 ZMYND10O75800 440 aa8.83□□□□□ -1
AP4E1-204ENST00000561004 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
AP4E1-204ENST00000561004 PNMA1Q8ND90 353 aa8.83□□□□□ -1
AP4E1-204ENST00000561004 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
AP4E1-204ENST00000561004 NLRP3Q96P20 1036 aa8.83□□□□□ -1
AP4E1-204ENST00000561004 MEN1O00255 615 aa8.82□□□□□ -1
AP4E1-204ENST00000561004 RAB15P59190 212 aa8.82□□□□□ -1
AP4E1-204ENST00000561004 POU4F2Q12837 409 aa8.82□□□□□ -1
AP4E1-204ENST00000561004 SLCO4C1Q6ZQN7 724 aa8.82□□□□□ -1
AP4E1-204ENST00000561004 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
AP4E1-204ENST00000561004 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
AP4E1-204ENST00000561004 NBPF10Q6P3W6 841 aaKnown RBP8.81□□□□□ -1
AP4E1-204ENST00000561004 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
AP4E1-204ENST00000561004 BARGINQ6ZT62 677 aa8.81□□□□□ -1
AP4E1-204ENST00000561004 DZIP3Q86Y13 1208 aaKnown RBP8.81□□□□□ -1
AP4E1-204ENST00000561004 CCDC125Q86Z20 511 aa8.81□□□□□ -1
AP4E1-204ENST00000561004 NBPF15Q8N660 670 aa8.81□□□□□ -1
AP4E1-204ENST00000561004 QPCTQ16769 361 aa8.8□□□□□ -1
AP4E1-204ENST00000561004 ADAM32Q8TC27 787 aa8.8□□□□□ -1
AP4E1-204ENST00000561004 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
AP4E1-204ENST00000561004 BMP4P12644 408 aa8.79□□□□□ -1
AP4E1-204ENST00000561004 BTBD6Q96KE9 485 aa8.79□□□□□ -1
AP4E1-204ENST00000561004 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
AP4E1-204ENST00000561004 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
AP4E1-204ENST00000561004 DCAF1Q9Y4B6 1507 aa8.78□□□□□ -1
AP4E1-204ENST00000561004 GRIP2Q9C0E4 1043 aa8.77□□□□□ -1.01
AP4E1-204ENST00000561004 A0A1W2PRU2 124 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 ESPNB1AK53 854 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 DGKGP49619 791 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-204ENST00000561004 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms