RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
CPNE6-218ENST00000560845 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
CPNE6-218ENST00000560845 FHDC1Q9C0D6 1143 aaPredicted RBP10.81□□□□□ -0.68
CPNE6-218ENST00000560845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.8□□□□□ -0.68
CPNE6-218ENST00000560845 ZNF784Q8NCA9 323 aaPredicted RBP10.8□□□□□ -0.68
CPNE6-218ENST00000560845 MTFR1LQ9H019 292 aa10.8□□□□□ -0.68
CPNE6-218ENST00000560845 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
CPNE6-218ENST00000560845 FYB1O15117 783 aa10.79□□□□□ -0.68
CPNE6-218ENST00000560845 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
CPNE6-218ENST00000560845 SYT17Q9BSW7 474 aa10.79□□□□□ -0.68
CPNE6-218ENST00000560845 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
CPNE6-218ENST00000560845 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
CPNE6-218ENST00000560845 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
CPNE6-218ENST00000560845 ERBB3P21860 1342 aa10.78□□□□□ -0.68
CPNE6-218ENST00000560845 PAPPAQ13219 1627 aa10.77□□□□□ -0.68
CPNE6-218ENST00000560845 NME9Q86XW9 330 aa10.77□□□□□ -0.69
CPNE6-218ENST00000560845 ACSBG1Q96GR2 724 aa10.77□□□□□ -0.69
CPNE6-218ENST00000560845 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.69
CPNE6-218ENST00000560845 RGPD5Q99666 1765 aa10.77□□□□□ -0.69
CPNE6-218ENST00000560845 USP31Q70CQ4 1352 aa10.77□□□□□ -0.69
CPNE6-218ENST00000560845 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPNE6-218ENST00000560845 ARXQ96QS3 562 aa10.76□□□□□ -0.69
CPNE6-218ENST00000560845 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
CPNE6-218ENST00000560845 INSRP06213 1382 aa10.76□□□□□ -0.69
CPNE6-218ENST00000560845 MAP3K5Q99683 1374 aa10.76□□□□□ -0.69
CPNE6-218ENST00000560845 IL2RBP14784 551 aa10.75□□□□□ -0.69
CPNE6-218ENST00000560845 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPNE6-218ENST00000560845 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
CPNE6-218ENST00000560845 COG3Q96JB2 828 aa10.75□□□□□ -0.69
CPNE6-218ENST00000560845 CFAP53Q96M91 514 aa10.75□□□□□ -0.69
CPNE6-218ENST00000560845 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
CPNE6-218ENST00000560845 USP54Q70EL1 1684 aa10.73□□□□□ -0.69
CPNE6-218ENST00000560845 MTHFSP49914 203 aa10.73□□□□□ -0.69
CPNE6-218ENST00000560845 ANKRD24Q8TF21 1146 aa10.73□□□□□ -0.69
CPNE6-218ENST00000560845 LRRC4BQ9NT99 713 aa10.73□□□□□ -0.69
CPNE6-218ENST00000560845 COL3A1P02461 1466 aaPredicted RBP10.73□□□□□ -0.69
CPNE6-218ENST00000560845 BTAF1O14981 1849 aa10.72□□□□□ -0.69
CPNE6-218ENST00000560845 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
CPNE6-218ENST00000560845 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
CPNE6-218ENST00000560845 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.69
CPNE6-218ENST00000560845 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
CPNE6-218ENST00000560845 GPR162Q16538 588 aa10.7□□□□□ -0.7
CPNE6-218ENST00000560845 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
CPNE6-218ENST00000560845 KLHL34Q8N239 644 aa10.7□□□□□ -0.7
CPNE6-218ENST00000560845 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
CPNE6-218ENST00000560845 LTN1O94822 1766 aa10.7□□□□□ -0.7
CPNE6-218ENST00000560845 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
CPNE6-218ENST00000560845 POLD1P28340 1107 aa10.69□□□□□ -0.7
CPNE6-218ENST00000560845 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
CPNE6-218ENST00000560845 DDX54Q8TDD1 881 aaKnown RBP10.69□□□□□ -0.7
CPNE6-218ENST00000560845 CHD4Q14839 1912 aa10.68□□□□□ -0.7
CPNE6-218ENST00000560845 GOLGB1Q14789 3259 aaKnown RBP10.68□□□□□ -0.7
CPNE6-218ENST00000560845 POLKQ9UBT6 870 aa10.68□□□□□ -0.7
CPNE6-218ENST00000560845 ADAMTS8Q9UP79 889 aa10.68□□□□□ -0.7
CPNE6-218ENST00000560845 EMILIN1Q9Y6C2 1016 aa10.68□□□□□ -0.7
CPNE6-218ENST00000560845 KCNQ4P56696 695 aa10.67□□□□□ -0.7
CPNE6-218ENST00000560845 RRS1Q15050 365 aaKnown RBP10.67□□□□□ -0.7
CPNE6-218ENST00000560845 IP6K1Q92551 441 aa10.67□□□□□ -0.7
CPNE6-218ENST00000560845 SYTL4Q96C24 671 aaPredicted RBP10.67□□□□□ -0.7
CPNE6-218ENST00000560845 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
CPNE6-218ENST00000560845 TFCP2L1Q9NZI6 479 aa10.67□□□□□ -0.7
CPNE6-218ENST00000560845 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
CPNE6-218ENST00000560845 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
CPNE6-218ENST00000560845 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
CPNE6-218ENST00000560845 DIAPH1O60610 1272 aaKnown RBP10.66□□□□□ -0.7
CPNE6-218ENST00000560845 GIGYF1O75420 1035 aaPredicted RBP10.66□□□□□ -0.7
CPNE6-218ENST00000560845 FBLN1P23142 703 aa10.66□□□□□ -0.7
CPNE6-218ENST00000560845 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
CPNE6-218ENST00000560845 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
CPNE6-218ENST00000560845 FAM208AQ9UK61 1670 aaKnown RBP10.66□□□□□ -0.7
CPNE6-218ENST00000560845 COL24A1Q17RW2 1714 aa10.65□□□□□ -0.7
CPNE6-218ENST00000560845 MEGF6O75095 1541 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 MAP3K19Q56UN5 1328 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
CPNE6-218ENST00000560845 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-218ENST00000560845 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPNE6-218ENST00000560845 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 CCNL1Q9UK58 526 aaPredicted RBP10.64□□□□□ -0.71
CPNE6-218ENST00000560845 DOT1LQ8TEK3 1739 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 FLT4P35916 1363 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
CPNE6-218ENST00000560845 MAP2P11137 1827 aaKnown RBP10.63□□□□□ -0.71
CPNE6-218ENST00000560845 TUBGCP6Q96RT7 1819 aa10.63□□□□□ -0.71
CPNE6-218ENST00000560845 HOXC9P31274 260 aa10.63□□□□□ -0.71
CPNE6-218ENST00000560845 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
CPNE6-218ENST00000560845 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
CPNE6-218ENST00000560845 LY75O60449 1722 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 MSH5O43196 834 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 YBX3P16989 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPNE6-218ENST00000560845 AMPHP49418 695 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 RUNDC1Q96C34 613 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
CPNE6-218ENST00000560845 GRIN3BO60391 1043 aa10.61□□□□□ -0.71
CPNE6-218ENST00000560845 IL13P35225 146 aa10.61□□□□□ -0.71
CPNE6-218ENST00000560845 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
CPNE6-218ENST00000560845 APAF1O14727 1248 aa10.6□□□□□ -0.71
CPNE6-218ENST00000560845 FKBP8Q14318 412 aa10.6□□□□□ -0.71
CPNE6-218ENST00000560845 MSL1Q68DK7 614 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms