RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
CRTC3-209ENST00000560320 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
CRTC3-209ENST00000560320 COL18A1P39060 1754 aa13.76□□□□□ -0.21
CRTC3-209ENST00000560320 CPDO75976 1380 aa13.75□□□□□ -0.21
CRTC3-209ENST00000560320 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
CRTC3-209ENST00000560320 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
CRTC3-209ENST00000560320 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
CRTC3-209ENST00000560320 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
CRTC3-209ENST00000560320 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
CRTC3-209ENST00000560320 CSB-PGBD3P0DP91 1061 aa13.74□□□□□ -0.21
CRTC3-209ENST00000560320 IFT57Q9NWB7 429 aa13.74□□□□□ -0.21
CRTC3-209ENST00000560320 FANCIQ9NVI1 1328 aa13.73□□□□□ -0.21
CRTC3-209ENST00000560320 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
CRTC3-209ENST00000560320 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
CRTC3-209ENST00000560320 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
CRTC3-209ENST00000560320 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
CRTC3-209ENST00000560320 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
CRTC3-209ENST00000560320 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
CRTC3-209ENST00000560320 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
CRTC3-209ENST00000560320 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
CRTC3-209ENST00000560320 BCL9LQ86UU0 1499 aa13.72□□□□□ -0.21
CRTC3-209ENST00000560320 ERBB3P21860 1342 aa13.71□□□□□ -0.21
CRTC3-209ENST00000560320 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
CRTC3-209ENST00000560320 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
CRTC3-209ENST00000560320 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
CRTC3-209ENST00000560320 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
CRTC3-209ENST00000560320 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
CRTC3-209ENST00000560320 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
CRTC3-209ENST00000560320 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
CRTC3-209ENST00000560320 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
CRTC3-209ENST00000560320 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
CRTC3-209ENST00000560320 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
CRTC3-209ENST00000560320 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
CRTC3-209ENST00000560320 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
CRTC3-209ENST00000560320 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
CRTC3-209ENST00000560320 LMO7Q8WWI1 1683 aa13.69□□□□□ -0.22
CRTC3-209ENST00000560320 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
CRTC3-209ENST00000560320 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
CRTC3-209ENST00000560320 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
CRTC3-209ENST00000560320 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
CRTC3-209ENST00000560320 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
CRTC3-209ENST00000560320 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
CRTC3-209ENST00000560320 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
CRTC3-209ENST00000560320 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
CRTC3-209ENST00000560320 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
CRTC3-209ENST00000560320 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
CRTC3-209ENST00000560320 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
CRTC3-209ENST00000560320 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
CRTC3-209ENST00000560320 MCM10Q7L590 875 aa13.67□□□□□ -0.22
CRTC3-209ENST00000560320 ZNF428Q96B54 188 aa13.67□□□□□ -0.22
CRTC3-209ENST00000560320 COL14A1Q05707 1796 aaKnown RBP13.67□□□□□ -0.22
CRTC3-209ENST00000560320 ATRNO75882 1429 aa13.66□□□□□ -0.22
CRTC3-209ENST00000560320 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
CRTC3-209ENST00000560320 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
CRTC3-209ENST00000560320 MS4A1P11836 297 aa13.66□□□□□ -0.22
CRTC3-209ENST00000560320 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
CRTC3-209ENST00000560320 EVA1CP58658 441 aa13.66□□□□□ -0.22
CRTC3-209ENST00000560320 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
CRTC3-209ENST00000560320 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
CRTC3-209ENST00000560320 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 PLIN1O60240 522 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 MBIPQ9NS73 344 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 SMC4Q9NTJ3 1288 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 USP21Q9UK80 565 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
CRTC3-209ENST00000560320 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
CRTC3-209ENST00000560320 BCAR3O75815 825 aa13.64□□□□□ -0.23
CRTC3-209ENST00000560320 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
CRTC3-209ENST00000560320 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
CRTC3-209ENST00000560320 CHL1O00533 1208 aa13.63□□□□□ -0.23
CRTC3-209ENST00000560320 ADAMTS2O95450 1211 aa13.63□□□□□ -0.23
CRTC3-209ENST00000560320 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
CRTC3-209ENST00000560320 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
CRTC3-209ENST00000560320 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
CRTC3-209ENST00000560320 CRB1P82279 1406 aa13.63□□□□□ -0.23
CRTC3-209ENST00000560320 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
CRTC3-209ENST00000560320 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
CRTC3-209ENST00000560320 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
CRTC3-209ENST00000560320 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
CRTC3-209ENST00000560320 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
CRTC3-209ENST00000560320 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
CRTC3-209ENST00000560320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
CRTC3-209ENST00000560320 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
CRTC3-209ENST00000560320 TEFQ10587 303 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
CRTC3-209ENST00000560320 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 CCDC136Q96JN2 1154 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
CRTC3-209ENST00000560320 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
CRTC3-209ENST00000560320 BRWD3Q6RI45 1802 aa13.6□□□□□ -0.23
CRTC3-209ENST00000560320 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
CRTC3-209ENST00000560320 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
CRTC3-209ENST00000560320 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
CRTC3-209ENST00000560320 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
CRTC3-209ENST00000560320 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
CRTC3-209ENST00000560320 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
CRTC3-209ENST00000560320 VAMP4O75379 141 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms